TQL Editor User Guide

Version 4.5.1

Introduction

The DTS Terminology Query Language (TQL) is a language for expressing statements (queries) that manipulate or export information found in the DTS Knowledgebase. TQL provides an alternative to direct API programming for more easily performing many common DTS maintenance, Q/A, and output tasks. The TQL Editor, available as both a DTS plug-in and standalone application, permits the creation, editing, saving and interactive execution of TQL queries. A TQL Class is also available to permit execution of queries from batch files and Java applications.

This TQL Editor User Guide provides a comprehensive description of the TQL Language and the operation of the TQL Editor. The TQL Reference Guide, also in the distribution kit, is a quick reference for TQL syntax formatted as a concise double-sided “trifold”. For previous users of TQL, the TQL V4.5 Release Notes are recommended as a brief update on new features.

The TQL Commander is a companion application for running parameterized TQL queries. See the Parameterized Queries section below for information on creating of parameterized queries. For instructions on using TQL Commander, see the TQL Commander User Guide.

Installation

Extract the files in TQLEditor-4.5.1.zip into your DTSInstall directory. Be sure the Use folder names box is checked. This will place all the TQL Editor files into the appropriate folders:

Folder Files

DTSInstall\bin\tqleditor TQLEditor.bat

TQLCommander.bat

TQL.bat

thesaurus-schema-v5.xsd

extension-schema-v5.xsd

ontylog-schema-V5.xsd

subset-schema-v4.xsd

TQL 4.5 Javadoc.zip

DTSInstall\lib\modules tqleditor.jar

pluginutils.jar

xmldigester.jar

poi-3.6-20091214.jar

poi-ooxml-3.6-20091214.jar

poi-ooxml-schemas-3.6-20091214.jar

DTSInstall\docs tqleditoruserguide.pdf

tqlcommanderuserguide.pdf

TQL V4.5 Release Notes.pdf

TQL V4.5 Reference Guide.pdf

DTSInstall\docs\help tqleditoruserguide.htm

tqlcommanderuserguide.htm

As desired, edit TQLEditor.bat, which runs the TQL Editor as a standalone application, TQL.bat, which runs TQL specification files in batch mode, and TQLCommander.bat, which runs the TQL Commander application, to accommodate your particular DTS environment.

Operation

TQL queries are sequences of English-like statements that permit the display, modification and export of DTS Knowledgebase information. TQL applications support the creation and/or execution of TQL queries. The primary TQL applications are:

· The TQL Editor, used to interactively create, maintain, and execute TQL queries. The TQL Editor is available as both a DTS Editor Module and a standalone application (accessed by running TQLEditor.bat from the DTSInstall\bin\tqleditor folder). The TQL Editor (and the TQL Commander) can be invoked via icons on the toolbar in the standard DTS Editor layout and as floating panels by selecting Tools|New TQL Editor (and Tools|New TQL Commander) from the menu bar. TQL implements the DTS V4 Module Architecture and can be used in custom DTS Editor layouts.

· The TQL Class, used to execute TQL query strings from either batch files or Java applications via the TQL API. For further information, see Using the TQL Class later in this Guide.

The following sections describe TQL and discuss how to create and run a TQL query using the TQL Editor.

The Terminology Query Language

Overview

A TQL query is a sequence of structured statements that describe a desired action on DTS terminology objects. There are nine types of statements and each statement type may have multiple forms. The statements are:

- The collection-statement which collects a set of Concepts or Terms for use by subsequent (subordinate) statements.
- The conditional-statement which supports conditional execution of statements based on the result of a boolean expression. The conditional-statement implements the familiar IF/ELSE construct used in other programming languages.
- The create-context-statement which creates contexts, or named groups, of Concepts. Statement forms are available to create DTS Namespaces, Subsets and Authorities. Additional forms create the TQL-specific contexts ConSets and TermSets: local files that can reference sets of Concepts and Terms.
- The delete-context-statement which deletes DTS and TQL contexts: Namespaces, Subsets, Authorities, ConSets and TermSets.
- The edit-statement which modifies existing DTS Knowledgebase information. Forms are available to create and delete Concepts and Terms, and add, update and delete Concept and Term Attributes.
- The export-statement which creates an export file (or list) of Concept and Term Attribute values. Delimited text (.txt), Excel (.xls and .xlsx), and XML (.xml) output formats are supported. Some forms of the export-statement export the complete contents of a Namespace, or definition of a Subset, to XML files. These files can be used for backup or exchange purposes.
- The set-variables-statement which sets the values of internal TQL variables.
- The output-statement which adds messages to the log or export data streams.
- The constrain-statement and parameter-statement that define the use of parameters in TQL queries.

In the sections that follow, TQL statement types, forms, and element names are shown in italics, and element keywords are shown in CAPITALS. Brackets enclose optional TQL elements, vertical bars denote alternation (alternate element forms), and literal characters are enclosed in quote marks. The brackets, vertical bars, and quotes are not part of the TQL statement. When writing a query, keywords may be entered in any case and any amount of whitespace (including spaces, tabs and returns) can be placed between TQL statements, keywords and elements to improve readability. Either single or double quotes can be used to enclose string literals in statements, and within a literal, the backslash character, “\” can be used to escape both quote marks (“\”” and ‘\’’), the tab character (“\t”) and itself (“\\”). TQL also supports escaping the caret (“^”) so that this character can appear in Namespace, Subset and Attribute names. Finally, note that every TQL statement must end in a semicolon.

The TQL is formally described via the simplified BNF grammar given in Appendix A. As an example of this BNF, the “production rule” (definition) of a TQL query is:

query := statement [ query ]

This is read as “a query is a statement, optionally followed by another query”, i.e., a query is a sequence of any number of statements.

Similarly, a statement is defined as one of the statement types (using the vertical bar to denote alternation):

statement := collection-statement |

conditional-statement |

create-context-statement |

delete-context-statement |

edit-statement |

export-statement |

for-statement |

output-statement |

set-variables-statement |

parameter-statement |

constrain-statement |

“A statement is a collection-statement, or a conditional-statement, or …”

Statement Classifications

Certain statements may only be used in specific locations in a query or in conjunction with other statements. A non-contextual statement can only appear at the top level of a query, i.e., it must start a query line as described above. A contextual, or subordinate, statement, in turn, can only be used in the scope of a collection-statement (see the Collection Statement section below for details). Contextual statements themselves can be restricted or un-restricted. A restricted contextual statement must be the ONLY statement in the scope of a collection-statement. A restricted contextual statement cannot occur in a statement-block. An unrestricted contextual statement can occur anywhere in the scope of its enclosing collection-statement and appear at any nesting level (see the Collection Statement and Conditional Statement sections below for details on nested statements). Some statements can be used in multiple positions, often dependent on the statements’ arguments. See Table 1 below and the individual statement sections for further information.

Table 1 – TQL Statement Classifications

Statement | Classification | Notes
collection-statement | Non-contextual |
conditional-statement | Unrestricted contextual |
constrain-statement | Non-contextual |
create-context-statement | Non-contextual |
delete-context-statement | Non-contextual |
edit-statement | Contextual | Restricted and unrestricted forms
export-statement | Restricted contextual | Some collection restrictions
for-statement | Unrestricted contextual |
output-statement | Contextual and non-contextual | Arguments must be consistent with statement usage
parameter-statement | Non-contextual |
set-variables-statement | Non-contextual | Arguments can be used in set-attrs-statement.

Common Elements

Most TQL statements use one or more instances of common TQL elements. These elements are described in the sections below.

The Variable Element

Variables are named, value-holding query elements. Both TQL internal variables (TQL Variables) and user-defined variables (User Variables) are available. TQL Variables are pre-defined (always present) and their values affect processing of related statements. Table 6 list these variables, where they are used, and their effects. Most TQL Variables can be assigned values via the set-variables-statement, or through selected command modifiers. User Variables are local to a particular query and have names that begin with the percent (“%”) character. User Variables are created and assigned values by the set-variables-statement. Once defined, they can subsequently be used in expressions (see the Expression Element section below).

The Attribute Element

The attribute element refers to a DTS Concept or Term Type Attribute, specifically a DTS Synonym Type, Property Type, Role Type or Concept Association Type, or a qualified DTS Property Type or Concept Association Type (using the syntax PROPORASSN_TYPE.QUALIFIER_TYPE). Defining Concepts, Defining Roles, Inverse Roles and Inverse Concept Association Types can also be specified. Throughout TQL, caret (“^”) bracketing is required around any explicit reference to the name of an attribute that contains any character other than letters, digits and underscores: ^My Property^.

By default, attribute references refer to attributes in the current context namespace. As necessary, an attribute can be associated with a specific namespace by placing the attribute’s namespace name in brackets after the attribute name: ^My Property[MySpace]^. If the current context is a Subset, ConSet, TermSet or All Namespace (ALL WITH … form) context, a non-namespace-qualified attribute is called an anonymous attribute. The type (actual instance) of an anonymous attribute is not resolved until run-time and is determined relative to the namespace of the current concept (or term) in the collection. In these statements:

FROM ALL WITH NAME EQUALS “XY*” EXPORT NAME, ^Code in Source^;

FROM {MySubset} EXPORT NAME, ^Code in Source^;

for each selected concept, the existence of a Code in Source Concept Property Type from the concept’s namespace is determined and if present, it’s value, if any, on the concept is exported.

Since two DTS Attributes can have the same name, but be of different types, e.g., a Property Type and an Association Type having the same name, TQL provides a syntax to disambiguate these names. The type of an attribute can be specified by post-fixing an attribute reference with a type code in parenthesis. Thus, ^MyAttribute[Demo]^(CP) forces MyAttribute to be interpreted as a Concept Property Type in the Demo Namespace. The following type codes are supported:

P or CP Concept Property Type

TP Term Property Type

A or CA Concept Association

TA Term Association

SA Synonym Association

R Role

PQ or CPQ Concept Property Qualifier

TPQ Term Property Qualifier

AQ or CAQ Concept Association Qualifier

TAQ Term Association Qualifier

TQL cannot know the type of an anonymous attribute, so anonymous attributes usually have a type code specified. If no type is specified, Concept Property Type is used as described in the above examples.

The Function Element

Like variables, TQL supports both TQL Functions and User Functions. Functions take a single argument and return a string value. The function argument can be certain TQL Attributes (see Table 2) and qualified or unqualified attributes. Extended attribute forms, i.e., the “encoded” and “displaying” forms, are not permitted. Functions can be used as selectors, predicates and in expressions when contextual expression-elements are permitted. When used as a selector or a predicate, if a function can return multiple values, e.g., LENGTH(CHILD) EQUALS 3, an “if any” condition is applied to the selector or predicate test. Table 5 describes the available TQL Functions.

A User Function, identified by a function whose name begins with a percent sign (“%”), is a user-developed extension to TQL. For example, the %REVERSE(arg) function might return the string value of its argument with the characters reversed. A User Function is created by writing a Java class that implements the TQLFunction class. This class, packaged in a jar file and placed in the lib\modules folder, is recognized by TQL on start-up and can subsequently be used in expressions in the same way as a TQL Function. See Appendix D - Writing a User Function for further information.

The Expression Element

The expression element is used as part of a selector in a collection, part of a predicate in a conditional-statement, or in an edit-statement, set-variables-statement, export-statement, output-statement, or constrain-statement. An expression is evaluated at query run-time to produce a string value. Syntactically, an expression is a sequence of expression-elements separated by expression-operators. An expression-element can be a numeric literal (12.34), string literal (“confirmed by”), a TQL Variable (AXIS), a User Variable (%NAME), a TQL Attribute (CONCEPT_NAME), a DTS Attribute (^Code in Source^), a TQL Function (LENGTH) or a User Function (%REVERSE).

The expression-operators and their semantics are:

The plus sign (“+”) Takes the numeric head of each of its arguments and returns the numeric sum (as a string).

The minus sign (“-“) Takes the numeric head of each of its arguments and returns the result of subtracting the second value from the first (as a string).

The ampersand (“&”) Returns the concatenation of the two string values.

The value of an expression is the result of applying each expression-operator to the run-time values of its right and left expression-elements. Evaluation proceeds strictly left to right (grouping via parentheses is not currently supported). Thus:

SET %N = 12 + “34AB” & 56;

sets the value of User Variable %N to the string “ 4656”.

There are two types of expressions: contextual and non-contextual. A non-contextual expression is one that does not depend on a Concept of Term; it is are made up solely of literals and variables. Non-contextual expressions are typically found in selectors. Contextual expressions can include an attribute or function, but there can only be one instance of a contextual element (an expression-element based on a Concept or Term), e.g. a TQL Attribute, DTS Attribute or TQL Function, in an expression. The following are examples of valid contextual expressions:

EXPORT “Capital of” & ^State Name^, “is” & ^State Capital^;

SET ^Code in Source^ = “CIS” & concept_code;

Some TQL statements have additional restrictions on expressions. These are documented in the associated statement descriptions.

The Comment Element

TQL permits two types of descriptive comments to be interspersed with statements. Comments may be inserted at any TQL element position. A line comment begins with two dash characters “--“and continues to the end of the line:

FROM myconset WITH CONCEPT_NAME EQUALS “A*” -- this is a line comment

EXPORT CONCEPT_NAME, CONCEPT_CODE;

A block comment is any string between the “/*” and “*/” character pairs:

FROM myconset WITH CONCEPT_NAME EQUALS “A*” /* this is a block comment

that continues to the next line */ EXPORT CONCEPT_NAME, CONCEPT_CODE;

The Collection Statement

The collection-statement collects a set of Concepts or Terms and, normally, executes a set of statements for each Concept (Term) in the resulting collection. The collection-statement is non-contextual: it can only be used as a top level statement in a query.

There is only one form of the collection-statement:

FROM [ modifier ] collection [ statement-block ] where

statement-block := statement |

“{“ statement-list “}”

statement-list := statement [ statement-list ]

modifier := “/” CONCEPTS |

“/” TERMS |

“/” STATUS “=” status

status := ALL

ACTIVE

INACTIVE

DELETED

The optional collection-statement modifiers affect the type of collection produced by the statement. The CONCEPTS modifier (the default) specifies that the collection should consist of Concepts in the collection’s context. The TERMS modifier similarly specifies that the collection should be of Terms. At most, one of CONCEPTS or TERMS may be present. The STATUS modifier specifies the DTS Status of all the objects (Concepts or Terms) in the collection. The default Status is ACTIVE. See the description of the Collection Element below for further information.

After the Concepts or Terms specified in the collection have been retrieved, the statements in the collection-statement’s scope, its statement-block, are executed. By the definition, a statement-block is either a single statement, or a list of statements enclosed in braces. All statements in the scope of a collection-statement must be contextual. See Table 1 above and the following sections for further information on contextual statements. In addition, if any such contextual statements are restricted, then the restricted contextual statement must be the ONLY statement in the scope, i.e., the statement-block must consist solely of the restricted contextual statement.

The statement(s) in the statement-block are executed, in the order specified, once for each Concept or Term in the collection. The statements in the statement-block are referred to as the subordinate statements of the collection-statement and their execution state is dependent on that of the enclosing collection-statement.

If the optional statement-block is not present, the collection statement simply enumerates a set of Concepts or Terms. This form is typically used for investigative purposes or for use by external applications using the TQL API. (See Using the TQL Class section for details on the TQL API.) As an example, the statement below produces no formal output, but the number of Concepts “collected” is reported in the Console panel of the TQL Editor and is available in the read-only SIZE TQL Variable as described in the Collection Element description below.

FROM [“SNOMED CT”] WITH ^SNOMED CT to ICD-9-CM map^ EXISTS;

The following sections describe additional elements used in the collection-statement.

The Collection Element

The collection element represents a set of DTS Concepts or Terms upon which TQL actions (statements) are performed. The basic collection element consists of a context (essentially the universe of Concepts or Terms from which collection objects are to be drawn) and, optionally, selectors that further refine, or filter, the objects to be chosen based on the values of object Attributes. The definition of collection is:

collection := ALL WITH selectors |

context [ WITH selectors ] where

context := “[“ namespace [ “:” version-name ] “]” |

‘[‘ namespace [ “#” version-date ] “]” |

“{“ subset [ “:” version-name ] “}” |

“{“ subset [ “#” version-date ] “}” |

conset |

termset

The selectors element is defined in the next section.

The context of a collection can be implicit or explicit. In the first collection form above, “ALL” designates that the object context is all Namespaces. In the second form, the context is explicit via the context element. In a context, namespace is the name of an existing DTS Namespace, subset is the name of an existing DTS Subset, authority is the name of an existing DTS Authority, conset is the name of an existing TQL ConSet file, and termset is the name of an existing TQL TermSet file, respectively. (A ConSet is a TQL-created file of Concept references and a TermSet is a TQL-created file of Term references. See the description of the create-context-statement below for further information on ConSets and TermSets.)

Any context, i.e., namespace, subset, authority, conset or termset, must be entered in the correct case, and, like attributes, must be surrounded by caret marks (“^”) if the name of the context contains any character other than letters, digits and underscores.

For Namespace and Subset contexts, the default Version used is the current (most-recent) Version. As shown above in the definition of context, another Version can be specified by providing either the version-name (using the colon delimiter) or a snapshot date (using the number-sign delimiter; a number of standard date formats are accepted):

[^SNOMED CT^:”2013.07.13AA”]

[^SNOMED CT^#”12/25/2013”]

Only Concepts or Terms from the specified Version will be included in the collection.

In DTS V4, a TQL collection has additional attributes: a collection-type (Concepts or Terms), and a collection-status (the Status of the Concepts or Terms to be included in the collection). These attributes are typically specified as the modifier on the FROM command keyword that is placed before the collection definition (see above), but can also be supplied implicitly as part of a statement.

The collection-type is determined by the presence (or absence) of a CONCEPTS or TERMS modifier. The TERMS modifier designates that the objects for the collection are DTS Terms. No modifier (or the infrequently-used CONCEPTS modifier) designates that the collection objects are DTS Concepts.

The value of the collection-status is set from the STATUS modifier or ACTIVE by default. Only concepts/Terms having the collection-status are included in the collection.

From these definitions, then, a collection can be specified as:

FROM ALL WITH selectors or

FROM [^SNOMED CT^] or

FROM/STATUS=”INACTIVE” [^SNOMED CT^] selectors or

FROM/TERMS [^SNOMED CT^] WITH selectors or

FROM {^CT Procedures^} or

FROM {^CT Procedures^} WITH selectors or

FROM myconset or

FROM myconset WITH selectors or

FROM/TERMS mytermset WITH selectors

In the first example, the collection is a Concept collection whose context is all Namespaces and the set of Concepts is completely defined by the selectors. (The FROM ALL form places certain restrictions on the selectors. See The Selector Element section below for details.) In the second example, the collection is all the Concepts in the given Namespace, i.e., all “SNOMED CT” Concepts. In the third example, the collection is all the Inactive Concepts from the “SNOMED CT” Namespace (the context) that also satisfy the selectors, In the fourth example, the collection is a set of Terms from the “SNOMED CT” Namespace which satisfy the selectors. The collection in the fifth example is all Concepts in the “CT Procedures” Subset (only Concepts can be selected from Subsets). In the sixth example, the “CT Procedures” Subset is the context and the set of Concepts is specified by the subsequent selectors. The collection in the seventh example is simply all the Concepts in the myconset ConSet. (The format for a TermSet is the same.) And in the final two examples, the context is the myconset ConSet, or mytermset TermSet, and the collection is qualified by the selectors.

After a collection is evaluated, the read-only TQL Variable SIZE is set to the number of Concepts or Terms in the collection. This variable can subsequently be referenced in output-statements, etc.

The Selector Element

Selectors further specify the Concepts in the collection. Selectors consist of one or more individual selector elements combined by the AND, OR and AND_NOT (logical operator) keywords. Parentheses may be freely used to specify grouping. An example of selectors (individual selector elements will be described in subsequent sections) would be:

^Code in Source^>400 AND

(CONCEPT_NAME EQUALS “A*” OR CONCEPT_NAME EQUALS “B*”)

An individual selector is a Boolean expression consisting of a select-attribute, a select operator, and (usually) an expression. (See the discussion of the specific operators below for details on expression requirements.) A select-attribute can be a TQL Function or User Function (described in the Function Element section above), a TQL Selector Attribute (described in Table 2) or an attribute (described in the Attribute Element section above). The Namespace for selector attributes defaults to the Namespace specified in the selector’s collection context. If there is not a Namespace context in the associated collection, each attribute must be post-fixed with its Namespace: ^Demo Code[Demo]^. This form can also be used to override the default Namespace assignment. TQL Variables and attributes must also be consistent with the enclosing collection-type, e.g., a Term Property Type selector attribute can only be used in a Term collection. (Entry of attributes, including required bracketing, can be simplified through the use of the TQL Attribute Chooser. See the discussion in The TQL Editor section below.)

Note that in the ALL WITH … collection form, the collection can only consist of selectors containing the NAME, CODE, ID or namespace-qualified attributes.

The select-attributes from each object in the context are tested according to the selectors and if the result is true, the object is included in the collection. Objects testing false are not included in the collection. Where multiple occurrences of an attribute may be present on an object, for example with Properties, an “if any” condition is implied in evaluating the object for selection.

The Selector Operator Element

Table 3 describes the selector operators. As shown in the Table, the various operators may or may not have a right operand, and may interpret the value of the right operand (if required) in different ways.

The two select-unop operators, EXISTS and NOT_EXISTS, do not have any right operand. EXISTS selects objects from the context on which the associated Attribute exists (has a value). NOT_EXISTS selects objects which do not have the named Attribute. One application of the NOT_EXISTS operator is to find “orphan” objects: Concepts WITH PARENT NOT_EXISTS.

The select-string-op operators compare the value of the specified Attribute with the right operand, a non-contextual expression (see the Expression Element section above for details on expressions). If the select-attribute is concept-valued (CONCEPT, PARENT, CHILD, ANCESTOR, DEFINING CONCEPT, Role, Concept Association or inverse Synonym), the testing is performed on the Concept Name of the Attribute’s target (“to”) Concept. If the select-attribute is term-valued (TERM, Term Association, or Synonym), the testing is performed on the Term Name of the Attribute’s target (“to”) Term.

For concept and term-valued selectors, the right operand can be a namespace-qualified string:

… with ^My Map to SCT^ EQUALS “Event (event)[SNOMED CT]” …

When this form is used, wildcards are not permitted. The namespace reference is removed before testing against the target Concept/Term name, but the resulting target must satisfy the namespace specification. I.e., in the example above, targets whose name is “Event (event)” in namespaces other than SNOMED CT would not satisfy the selector. This form facilitates use of Drag and Drop (from other DTS panels) and TQL parameters as the operand.

When a numeric operator (select-numeric-op) is used with an Attribute, the expression should resolve to a number, and a numeric data type interpretation is made on the leading characters of the specified Attribute value. For example, a selector of Default_Dose>=4.5 will be satisfied on a Default_Dose Property value of “5.2 mg”. Note that the negated value testing operators (NOT_EQUALS, NOT_MATCHES, and negated numeric operators) only check objects in the context which actually have a value for the associated Attribute. To select objects in the context that do not have a value for the Attribute, use NOT_EXISTS.

The select-concept-op operators must be used with concept-valued Attributes (see above) and compare the values of these Attributes with other Concepts as described in the Table 3. The expression value must resolve to the name of a Concept that represents the “root” of a subtree against whose Concepts the Attribute targets will be tested. Thus:

MyMapAssn DESCENDANT_OF “Clinical Finding (finding)[SNOMED CT]”

selects all Concepts whose MyMapAssn targets fall under the SNOMED “Clinical Finding (finding)” Concept. It is likely that (as above) the Namespace-qualified Concept name will need to be used in this selector since the context for the selector (i.e., the default Namespace for the Attribute) will usually not be SNOMED CT, but rather another Namespace. Note that all select-concept-ops implicitly use the AXIS TQL Variable to determine the hierarchy relationship. See Table 6 for further information.

The select-member-op operator tests whether its left operand (concept-valued) Attribute is a member of the context specified by the right operand. This right operand is not an expression but a context form. Thus:

MyMapAssn MEMBER_OF [^SNOMED CT^]

selects Concepts whose MyMapAssn targets are in the SNOMED CT Namespace.

There are additional limitations in the combination of the select-operators with specific select-attributes which are described in detail in Table 4. The most important consideration is that some forms currently require searching through all of the objects in the context, for example, those with the operator NOT EXISTS. This can have severe, if not terminal, effects on performance. As a result, it is recommended that these forms not be used in large Namespaces such as SNOMED CT. For further suggestions on the use of selectors and select-operators, see the Additional Query Considerations section below.

Finally, be aware of the interaction between the collection context and the selectors. The following are examples of collections that demonstrate the interaction of these elements:

ALL WITH ^Demo Code[Demo]^ EXISTS Collection consists of all Concepts (from any Namespace) that have the Demo Code Property

[Demo] WITH ^Demo Code^ EXISTS Collection consists only of Concepts from the Demo Namespace that have the Demo Code Property

[^SNOMED CT^] WITH ^Demo Code[Demo]^ EXISTS

Collection consists of Concepts from the SNOMED CT Namespace that have the Demo Code Property.

The Conditional Statement

The conditional-statement allows execution of subordinate statement(s) based on the Boolean value of its associated predicates element. The conditional-statement is an unrestricted contextual statement; it can be used as a subordinate statement in a collection-statement at any depth.

There are three forms of the conditional-statement:

IF predicates statement-block

ELSE statement-block

ELSEIF predicates statement-block

The first (IF) form, takes a single predicates argument and has a statement-block as a scope (see the Collection Statement section above for a description of the statement-block element). The predicates element is similar to the selectors element: it has an LHS that is an attribute, a TQL operator, and a RHS Expression. (The predicates element is described in detail below.) The predicates element is evaluated for each Concept (or Term) in the enclosing collection. If the predicates evaluates to true, the statements in the statement-block are executed. If the predicates evaluates to false, the statement-block is ignored.

FROM [Demo]

IF NAME EQUALS “T*” PRINT NAME; --print concepts in Demo that begin with ‘T’

In the above query, the equivalent result could be accomplished with a selector in the enclosing collection-statement. In fact, the use of a selector is more efficient than a predicate since the predicate must be evaluated for every object in the collection. Once a collection has been created, however, the IF statement can provide new functionality not previously available in TQL.

The second (ELSE) form must immediately follow an IF (or ELSEIF) and inverts the sense of the preceding predicates; if the preceding IF (or ELSEIF) predicates evaluated to false, the statements in the statement-block following the ELSE are executed.

The third (ELSEIF) form, which must immediately follow an IF or another ELSEIF, combines the function of an ELSE and IF to more easily permit “chaining” of conditionals. Without this form, nested blocks would be required. Here is an example using all three forms:

FROM [^States of the Union^] {

IF Capital equals “a*” PRINT “The Capital of “ & NAME & “ starts with A”;

ELSEIF Capital equals “b*” PRINT “The Capital of “ & NAME & “ starts with B”;

ELSEIF Capital equals “c*” PRINT “The Capital of “ & NAME & “ starts with C”;

ELSE PRINT “The Capital of ” & NAME & “ is not an A, B, or C”;

}

The Predicates Element

The predicates element is used in forms of the conditional-statement to determine whether or not the statement’s statement-block is to be executed. The predicates element is an extension of the selectors element: it consists of one or more individual predicate elements combined by the AND, OR and AND_NOT keywords. An individual predicate is a Boolean expression consisting of a predicate-attribute, a select operator, and (usually) an expression. (See the Selector Element section above for additional information on these elements.)

A predicate differs from a selector in three important ways:

1. The predicate-attribute permits TQL and User Variables in addition to the DTS Attributes of a selector.

2. The predicate-attribute can be anonymous. See the description of anonymous-attributes in the Attribute Element section above. In the example below, the predicate accepts concepts whose namespace contains a Code in Source Concept Property Type and whose Code in Source value on the concept (if any) begins with “1”:

^Code in Source^(CP) EQUALS “1*”

3. The expression of a predicate can be contextual – it can contain attributes that are dependent on the Concept or Term of the enclosing collection. (See the Expression Element section above for details on expressions.) Thus the predicate below would be permitted in a conditional-statement:

CODE NOT_EQUALS ^Code in Source^

The Create Context Statement

The create-context-statement is used to create a named context: a DTS Namespace, Authority, Subset, ConSet or TermSet. This context can then be used in subsequent TQL statements. The create-context-statement is a non-contextual statement: it can only be used at the “top-level” of a query; it cannot be used as a subordinate statement.

There are four forms of the create-context-statement:

CREATE “<”authority”>” “;”

CREATE “[“ namespace “:” authority [ “:” nstype [ “:” linked_namespace ] ] “]” “;”

CREATE create-context FROM[/TERMS ] collection “;”

CREATE create-context FROM build-context log-op build-context “;”

create-context := “{“ subset “:” authority ”}” |

termset |

conset

build-context := “{“ subset ”}” |

termset |

conset

nstype := THESAURUS | ONTYLOG | ONTYLOG_EXTENSION

The first two form creates a new Authority.

CREATE <^My Authority^>;

The second form creates a new Namespace. Note that when creating a Namespace, the new Namespace’s Authority must be specified and must be a previously existing Authority. There are four options for this form:

CREATE [^My Namespace^:^My Authority^];

CREATE [^My Namespace^:^My Authority^:THESAURUS];

CREATE [^My Namespace^:^My Authority^:ONTYLOG];

CREATE [^My Namespace^:^My Authority^:ONTYLOG_EXTENSION:^SNOMED CT^];

The first two options are equivalent and create a local Thesaurus Namespace with the specified name and Authority. The third option creates a local Ontylog Namespace, and the last option creates an Ontylog Extension Namespace linked to SNOMED CT as a base Namespace. When creating an Extension Namespace, the linked Namespace name is required.

The third form creates a Subset, ConSet or TermSet from the set of Concepts (or Terms) defined by the collection element(s). All of the Concepts (or Terms) resulting from the collection element are made part of the create-context. Note that the STATUS modifier is not permitted on the FROM keyword and the TERMS keyword is only permitted when creating a TermSet.

Note: TQL always creates a Subset made up of individual Concepts even if the collection is defined using hierarchy attributes such as ANCESTOR or PARENT, i.e., hierarchy-based Subset definition methods are never applied. This may have performance implications for large Subsets. Use the DTS Subset Editor to create true intensional Subset definitions.

An alternate methodology for Subset creation is to set a specific Property on a collection using a set-attributes-statement (see discussion below) and build the Subset in the DTS Subset Editor with a Subset Expression that uses this Property.

A ConSet (or TermSet) is a named set of Concepts (Terms) that can be used as a context in other TQL statements. ConSets and TermSets are not a recognized part of the DTS schema and cannot be shared between different DTS Editor or TQL Editor instances; they are only used for managing local client TQL results. When the features and persistence of DTS Subsets are not required, however, the use of ConSets and TermSets can provide a simpler and more efficient object grouping mechanism. Use of Subsets, ConSets, and TermSets can also sometimes improve the performance of complex queries (see Additional Query Considerations below).

Technically, a ConSet or TermSet is implemented as a file in the local file system that contains references to the Concepts/Terms specified by the context/selector elements. The name of a ConSet file is tql_conset.tqc where conset is a TQL name-word (a string consisting of letters, numbers and underscores). Similarly, the name of a TermSet file is tql_termset.tqt. The file is created in the current working directory.

The fourth form of the create-statement creates a Subset, ConSet or TermSet as an algebraic combination of build-contexts (Subsets, ConSets or TermSets) The log-op connector element is one of the three supported logical operators: OR, AND and AND_NOT. Thus:

CREATE consetC FROM consetA OR consetB;

places the union (unique sum) of the Concepts in consetA and consetB into consetC;

CREATE consetC FROM consetA AND {subsetA};

places the intersection (common) Concepts of consetA and subsetA into consetC;

CREATE termsetC FROM/TERMS termsetA AND termsetB;

places the union of the Terms in termsetA and termsetB into termsetC. When using the terms-type collection (FROM/TERMS) both build-contexts must TermSets.

Finally,

CREATE {subsetC:myauthority} FROM {subsetA} AND_NOT {subsetB};

places those Concepts from subsetA that are not in subsetB into subsetC, i.e., subsetA “minus” subsetB. Note that as of DTS V4, the name of an existing Authority must be added to the create-context when creating a subset.

Note: As of TQL 4.0, TQL can create a Subset that consists of Concepts from more than one Namespace. This is only possible when creating the Subset from ConSet(s) that contain Concepts from multiple Namespaces.

The Delete Context Statement

The delete-context-statement permits a TQL user to delete DTS and TQL contexts. The delete-context-statement is a non-contextual statement: it can only be used at the “top-level” of a query; it cannot be used as a subordinate statement.

The form of the delete-context-statement is:

DELETE context “;”

The delete-context-statement permanently deletes the designated context, and its contents, from the DTS Knowledgebase, or file system in the case of a ConSet or TermSet context. When executed from the TQL Editor application, a confirmation dialog is first displayed. Successful execution of the delete-statement requires that the DTS User has the MANAGE Permission on the affected context (for Namespaces, Subsets and Authorities). If the context to be deleted is an Ontylog Namespace, no Extension Namespaces can be linked to this namespace.

Note: There is no undo available for the delete-context-statement!

The Edit Statement

An edit-statement allows modification of Namespace data in the DTS Knowledgebase. Execution of the edit-statement requires that the DTS User has the WRITE Permission on the affected Namespace. The edit-statement is a contextual statement: it must be used in the scope of an enclosing collection-statement. The edit-statement has both restricted and unrestricted forms and some forms have additional restrictions on the enclosing collection. Details are provided below.

There are eleven forms of the edit-statement:

create-concepts-statement:= CREATE_CONCEPTS create-object-list “;”

create-terms-statement:= CREATE_TERMS create-object-list “;”

delete-concepts-statement:= DELETE_CONCEPTS[/PRUNE_TERMS][/PERMANENT] “;”

DELETE_CONCEPTS[/PRUNE_TERMS][/PERMANENT] concept-list “;”

delete-trees-statement:= DELETE_TREES[/RETAIN_HEAD][/PRUNE_TERMS] [/PERMANENT] “;”

DELETE_TREES[/RETAIN_HEAD][/PRUNE_TERMS] [/PERMANENT] concept-list “;”

delete-terms-statement:= DELETE_TERMS[/PERMANENT] “;”

DELETE_TERMS[/PERMANENT] [term-list ] “;”

delete-attributes-statement:= DELETE[/PRUNE_TERMS]delete-attr-list “;”

set-attributes-statement:= SET set-attr-list “;”

update-attributes-statement:= UPDATE update-attr-list “;”

delete-attr-list := delete-attr-arg [ “,” delete-attr-list ]

set-attr-list := ( set-attr-arg | set-var-arg ) [ “,” set-attr-list ]

update-attr-list := set-attr-arg [ “,” update-attr-list ]

The create-concepts-statement and create-terms-statement create new instances of Concepts and Terms in the DTS Knowledgebase. These statements are restricted contextual statements; they must be the ONLY statement in the scope of their enclosing collection-statement. In addition, Selectors are not permitted in the enclosing collection of these statements and the collection-status must be ALL or ACTIVE. (In the create-terms-statement, the use of the TERMS modifier is optional.) The create-object-list is a list of the names of the objects to be created. Word, string literal and Attribute forms are supported for the names. TQL gives an error if any Name already exists. Optional forms enable specification of the object’s Code and/or Id respectively:

CREATE_CONCEPTS ConceptOne, “Concept Two”, ^Concept Three^;

CREATE_CONCEPTS Concept1:”CODE1”, Concept2:”CODE2”;

CREATE_CONCEPTS Concept1::1, Concept2::2;

CREATE_CONCEPTS Concept1:”CODE1”:1, Concept2:”CODE2”:2;

If either Code or Id is not specified, the DTS Server uses its internal Code and Id Generator to provide the required values.

The delete-concepts-statement, the delete-trees-statement and the delete-terms-statement delete Concepts and Terms from the DTS Knowledgebase. For the delete-terms-statement, if multiple Terms have the same name, all such Terms are deleted. These statements are restricted contextual statements; they must be the ONLY statements in the scope of their enclosing collection-statement.

The default DTS V4 behavior of delete is to set the associated Concept or Term Status to DELETED. If it is desired to permanently delete a Concept or Term, i.e., remove the object from the Knowledge completely, add the /PERMANENT modifier to the delete command name. Once deleted using the PERMANENT modifier, a Concept or Term cannot be recovered.

These three statements each have two forms: one without arguments and one with arguments. The unargumented forms operate on all the Concepts (or Terms) in the enclosing collection. The second, argumented forms, operate only on the Concepts or Terms in the argument list. Word, string literal and Attribute name forms are permitted in the argument lists.

The delete-concepts-statement and delete-terms-statement delete the associated (implicit or explicit) Concepts or Terms from the specified Namespace. (The TERMS modifier is optional in the delete-terms-statement.) The delete-trees-statement forms are similar to the delete-concepts-statement forms except that in addition to deletion of the Concepts specified in the concept-list, all of these Concept’s descendants are also deleted. (The hierarchy relationship used for descendants is the current value of the AXIS TQL Variable. See Table 6.) If the RETAIN_HEAD TQL Variable (see Table 6 and the Set Statement section below) is true in the context of a DELETE_TREES statement, or present as a statement modifier, the named (head) Concepts are not deleted, only the descendants of the Concepts are removed. When a delete-concepts-statement, delete-terms-statement or a delete-trees-statement is executed from the TQL Editor application, a confirmation dialog is displayed before any deletion occurs.

By default, the delete-concepts-statement and delete-trees-statement only delete Concepts. No Terms associated with any deleted Concepts are removed. If the PRUNE_TERMS TQL Variable has been set to TRUE (via a previous set-variables-statement or command modifier), however, Terms that would be made orphans by deletion of the specified Concept will themselves be deleted. (If the /PERMANENT modifier has been added to the statement, orphan Terms will be permanently deleted as well.) An orphan Term is defined as a Term having no Synonym relationships to any Concepts. See the Set Statement section below for further information on the PRUNE_TERMS and other TQL Variables.

The delete-attributes-statement, set-attributes-statement and update-attributes-statement operate on the Attributes of the Concepts or Terms specified in the enclosing collection. Selectors are permitted in the collection. These statements are unrestricted contextual statements; they can be used as subordinate statements in a collection-statement at any depth.

The delete-attributes-statement deletes the specified Attributes on the Concepts or Terms referenced in the collection from the DTS Knowledgebase. The delete-attr-list is a comma-delimited list of delete-attr-args: Synonym Types, Property Types, Defining Concepts, Defining Role Types, and Concept Association Types, or DTS Term Attributes: (inverse) Synonym Types, Term Property Types and Term Association Types. The specified Type can, optionally, be followed by an equals sign (“=”) and expression. When the expression is absent, the delete-attributes-statement deletes all occurrences of the specified Attributes from the Concepts or Terms referenced in the collection. When a value is given, only those Attributes having the value are deleted:

DELETE OldProp, RealProp = “false”;

deletes all occurrences of OldProp from all Concepts in the Demo Namespace but only those occurrences of RealProp that have the value “false”.

delete-attr-list elements can also include qualified forms of Property Types and Concept Association Types:

DELETE OldProp.Qual;

DELETE OldProp.Qual = “09/02/2010”;

DELETE OldProp.Qual = “Active”. “09/02/2010”;

The first form deletes all occurrences of the Qualifier Qual from all occurrences of the Property Type OldProp that exist on any Concept in the Demo Namespace. The second form deletes all occurrences of Qualifier Qual whose qualifier value is “09/02/2010” from all OldProp Property Types. Finally, the third form deletes occurrences of Qualifier Qual whose value is “09/02/2010” but only on those OldProp Properties that have the property value “Active”. When used with Association Types, the first value in the third example refers to the Association’s target Concept (or Term).

The PRUNE_TERMS TQL Variable can be used on the delete-attributes-statement (Concept collection-types only) to specify that orphan Terms be removed when Synonyms are deleted. If the PRUNE_TERMS modifier is used, the /PERMANENT modifier can also be added to the statement to permanently delete the orphan Terms. (See Table 6 and the Set Variables Statement section below for further information.)

The set-attributes-statement and update-attributes-statement add (or update) Names, Statuses, Synonyms, Properties, Associations, Defining Concepts and Roles on the Concepts or Terms referenced in the collection. The set-attr-list is a comma-delimited list of elements consisting of CONCEPT_NAME, CONCEPT_STATUS, TERM_NAME, TERM_STATUS, NAME, STATUS, Synonym Types, Concept Property Types, Concept Association Types, Role Types or the keyword DEFINING_CONCEPT for Concept forms, or (inverse) Synonym Types, Term Property Types or Term Association Types for Term forms. As with the delete-attr-list, an optional the equals sign (“=”), and expression can be included. Different Types can be mixed in the set-attr-list.

Examples:

SET MySynonym = “AConcept”, MySynonym = “A Concept”:P;

SET batch = 3.0, updated = “set on @D”;

SET INV ^Parent Of^ = “My Root”;

For Synonym Type and Association Type set-attr-list elements, the value must be the name of an existing Term or Concept as appropriate for the context of the statement. To specify that a created Synonym should be the preferred Synonym, append “:P” to the value, as shown in the first example above.

As shown in the second example above, string literals in the value expression can contain one or more of the (case-insensitive) TQL special symbols given in Table 7. These symbols are replaced by their associated values on expression evaluation. In the third example, the INV keyword is used to specify that an Inverse Concept Association pointing to the “My Root” Concept be set on the selected Concepts.

For Defining Concepts and Role Types, the statement context must be an Extension Namespace and the value must be the name of an existing Concept. Note the use of Namespace-qualified arguments to refer to Concepts in the base Ontylog Namespace:

SET DEF ^finding site (attribute)[SNOMED CT]^ =

“Liver structure (body structure)[SNOMED CT];

SET DEFINING_CONCEPT =

“Liver structure (body structure)[SNOMED CT]”;

The difference between the set-attributes-statement and update-attributes-statement is the semantics of how the Synonym, Property or Association Attribute is created. For the set-attributes-statement, a new Attribute is always created on each selected object. For the update-attributes-statement, a new Attribute is only created if there is not an existing Attribute of the designated Attribute Type on the object. If there is any occurrence of the Attribute Type, all such occurrences will be updated to (replaced by) a single instance of the Attribute Type with the specified value. When an Attribute value is updated, any Qualifiers will be retained. Note that the CONCEPT_NAME, CONCEPT_STATUS, TERM_NAME, and TERM_STATUS attributes (or their NAME and STATUS alias) can only be used with the update-attributes-statement.

Similar to the delete-attributes-statement, set-attr-list elements can include qualified forms:

UPDATE batch.date = “@D”;

SET ^Parent Of^.Qual = “My Root”.”Defined”;

In the first example, a date Qualifer is updated (or added) with the current date on all existing occurrences of the batch Property. If there is no occurrence of a batch Property on the Concept, no action is taken. This form (propType.qualType=expression) is only available for the UPDATE statement. In the second form, applicable to both SET and UPDATE, a Qualifier Qual is updated/set with value ”Defined” on all occurrences of the Concept Association Type “Parent Of” whose target is “My Root” . This form will only create a new Concept Association (or Property) if one with the stated value does not already exist.

Setting and updating of Property and Qualifier Attributes respects the presence of any Validator on the respective Property or Qualifier Types. An error is thrown if the specified value does not pass the Validator.

Finally, note that the arguments of the set-attributes-statement (the set-attr-list) include set-var-args, allowing this statement to also set TQL variables. Both contextual (attribute) and non-contextual (variable) arguments may be mixed in the set-attributes-statement. See the description in the Set Variables Statement section below for information on setting the value of variables.

The Export Statement

The export-statement creates an export file (or list) of DTS Knowledgebase Attributes and their values. Export is performed to the file given in the EXPORTFILE TQL variable, or the Output file field in the TQL Editor panel if running TQL interactively. The export-statement is a restricted contextual statement. It must be the ONLY statement in the scope of its enclosing collection-statement. Any collection-type or collection-status can be used, however, some restrictions on the collection context may apply.

There are five forms of the export-statement:

export-concepts-statement: EXPORT_CONCEPTS[/SUBSET_VIEW][/TYPEDEFS] “;”

EXPORT_CONCEPTS[/TYPEDEFS] “;”

export-subset-statement EXPORT_SUBSET “;”

export-namespace-statement: EXPORT_NAMESPACE “;”

export-attributes-statement: EXPORT export-list [ SORTED_BY sort-list ]“;”

The first four forms are used to export populated DTS objects from the collection of the enclosing collection-statement into an XML file. Output can be directed to the console or to files, but only files having an XML extension will be accepted. The paragraphs below describe the general content and structure of the files created from these forms. More specifically, the export files satisfy the thesaurus-schema-v4, extension-schema-v4, subset-schema-v4 schemas (.xsd) available in the bin\tqleditor directory. For additional details on TQL XML export file processing see the Exporting to XML section below.

The first form of the export-concepts-statement exports the Terms and Concepts (having the designated Status) of the designated context along with all of their Attributes. Collection selectors are not permitted with this form. For a Namespace context, the export file consists of all Term and Concept elements along with their Attributes. Terms are only included if they are Synonyms of the exported Concepts, and only Attributes owned by the Concept’s Namespace are exported (this handles the case of Subset and ConSet contexts for which there is no defined Namespace). Property, Association and Qualifier Type definitions will only be included if the TQL TYPEDEFS variable is true or TYPEDEFS is included in the command modifiers. For all contexts, Term and Concept Attribute elements (Synonyms, Properties, Roles, and Concept Associations) are enclosed within their respective Term and Concept elements. If the Namespace is an Ontylog Extension Namespace the Defined-View attributes are exported; non-defining Roles are not included but each Concept’s Primitive Attribute, Defining Concepts and Defining Roles are enclosed.

If the context is a Subset and the Subset’s namespaces are Ontylog Namespaces, the SUBSET_VIEW modifier can be used which exports the “collapsed” Subset Hierarchy Superconcepts/Subconcepts. The Subset Hierarchy reflects the hierarchical relationship of the original Namespace, but “skips” Concepts not in the Subset. The Subset Hierarchy is shown in the DTS Editor Tree panel when a Subset is selected and “Subset Hierarchy” is chosen as the View Axis. One of the objectives of the export-subset-statement with the SUBSET_VIEW modifier is to provide a Subset-centric export of Subset Concepts for use by external applications.

The second form of the export-concepts-statement exports the Concepts (with their associated Synonym Terms and Attributes) designated by selectors present in the collection. As with the first form, type definitions are not written unless the TQL TYPEDEFS variable is true or TYPEDEFS is included in the command modifiers.

The export-concepts-statement form is a common method for exporting local Concept-based Namespaces. The following Namespace objects are, however, NOT exported by this statement:

· “Mapping” Associations owned by the Namespace but that do not reference any Concept in the Namespace

· Namespace Concept and Term Properties owned by the Namespace but that are associated with Concepts or Terms in other Namespaces

· Namespace Synonyms owned by the Namespace but that are associated with Concepts in Other Namespaces

· Namespace and Namespace Version Properties

See the description of the export-namespace-statement below to export these objects.

The export-subset-statement exports all the definitional information associated with a Subset. Data on specific members of the Subset is not included. The context must be a Subset and selectors are not permitted. This form enables exchange of Subset definitions between DTS systems. The export-subset-statement provides a complete extract of Subset information including Subset Description, Expression, and TypeDefs and Attributes for Subset and Subset Version Properties. Loading of exported files is supported by Import Wizard V4.1.

The export-namespace-statement exports all the objects of the designated Namespace. The context must be a Namespace and selectors are not permitted. Only objects owned by (created in) the Namespace are exported. The export file begins with all Validator, Property, Association and Qualifier Type elements, followed by Concept and Term elements (subject to STATUS modifier restrictions) with all of their Attributes, and finally additional elements not associated with Concepts and Terms such as non-local Properties, non-local Associations and Namespace and Namespace Version Properties. If exporting the contents of an Ontylog Namespace, Kind definitions are included. If exporting an Ontylog or Ontylog Extension Namespace, Role Type definitions are included and the Primitive Attribute, Kind Attribute, Defining Concept and Defining Role elements, are enclosed within their associated Concept. Also, Qualifier Attribute elements are enclosed within their associated Property or Association elements. The export-namespace-statement produces a complete copy of the Namespace since it includes all objects whether or not they are associated with local Terms or Concepts. Thus this form can be used for any Namespace, including so-called “mapping” Namespaces, which have no Concepts of their own.

Any export file created by either the export-subset-statement or export-namespace-statement (that includes Type definitions) can subsequently be imported into other DTS Subsets or Namespaces using the Import Wizard plug-in, recreating/reloading the selected contents. It is recommended that such an import be made to a completely empty Namespace or new Subset. Import Wizard Version 4.1 or later MUST BE USED for exports created by TQL Version 4.0. Support for export and import of Ontylog Namespaces requires TQL Version 4.5 and Import Wizard Version 4.5 respectively. For further information on importing TQL XML files, see the DTS Import Wizard User Guide.

The export-attributes-statement outputs a set of string values evaluated in the context of each of the Concepts or Terms present in the enclosing statement’s collection. Optionally, the lines/rows of the export can be sorted by Attributes specified in the sort-list. Delimited text (.txt), Excel (.xls and .xlsx) and XML output formats are supported.

Formally, the export-list is a comma-delimited list of expressions. Arbitrary expressions are supported, but most commonly these expressions are contextual, containing attributes, functions, variables and the TQL Export Attributes shown in Table 2. Anonymous attributes are permitted.

If the attribute is a Property Type or Concept Association Type, the attribute’s Qualifiers may also be displayed using the qualifier syntax: PROPORASSN_TYPE_NAME.QUALIFIER_TYPE_NAME. If the attribute is a Role Type, the form ROLE_TYPE_NAME.GROUP returns the Role Group number associated with the Role(s).

For the TQL Export Attributes SYNONYM, PROPERTY, ASSOCIATION and ROLE, the default display string is the “value” of the (possibly multiple) DTS Attribute instance(s): Synonym Term Name, Property Value, Association target Concept or Term Name, and Role target Concept Name. To export the Type name of the Attribute, the TYPE modifier can be used. The default string is also available using the VALUE modifier.

EXPORT NAME, PROPERTY.TYPE, PROPERTY.VALUE;

A TQL export-list expression also supports two extended attribute forms. These forms enable Concept (or Term) Attributes in one Namespace to reference Concepts (or Terms) in another Namespace.

If the base Attribute is concept-valued (CONCEPT, PARENT, CHILD, ROLE, ASSOCIATION, INV SYNONYM, DEFINING CONCEPT, Role Type, Concept Association Type or inverse SynonymType) the element displayed in the export record is, by default, the target Concept’s CONCEPT_NAME, but can also be any string-valued Attribute (for example a Concept Property) of the base Attribute’s target Concept. These display Attributes are described in TQL by the “displaying” syntax:

PARENT->CONCEPT_CODE

which outputs the value of the CONCEPT_CODE Property of the base Concept’s Parent. Valid target Attributes for the displaying syntax are:

· CONCEPT_NAME or NAME (the default),

· CONCEPT_CODE or CODE,

· CONCEPT_ID or ID,

· CONCEPT_STATUS or STATUS,

· QUALIFIED_NAME,

· PREFERRED_NAME,

· RESOLVED_NAME,

· PRIMITIVE,

· NAMESPACE, and

· Concept and Term Property Type (including anonymous Property Types)

If the attribute references a Concept in a different Namespace, the displaying Property Type must be qualified with the target Namespace to disambiguate the Attribute, e.g.: PARENT->”Code in Source[SNOMED CT]”.

If the attribute is a Property Type, and the value of the Property “encodes” (is the same value as) a Name, Code, Id or unique Property on another Concept, the referenced Concept can be represented using the “encoded” syntax:

MAP_PROP|CONCEPT_CODE[^SNOMED CT^]

MAP_PROP|^Code in Source[SNOMED CT]^

In the first example, this creates a concept-valued export element (from the SNOMED CT Namespace) using the Concept whose Code is the same value as the base Concept’s MAP_PROP Property. (CONCEPT_NAME, CONCEPT_CODE, and CONCEPT_ID can be used in this form.) In the second example, a concept-valued export element is returned using the Concept whose Code in Source Property has the same value as the base Concept’s MAP_PROP Property. While the explicit Namespace in the second component is not required, as with the displaying syntax it is typically needed since the encoded export element is often in a different Namespace than the statement’s default context. By itself, the exported value of an encoded element will be the referenced Concept’s CONCEPT_NAME. The encoded form can, however, be combined with the displaying form to access other Attributes as in:

MAP_PROP|^Code in Source[SNOMED CT]^->QUALIFIED_NAME

If the base Attribute is term-valued (TERM, SYNONYM, Synonym Type, or Term Association Type) the element displayed in the export record is, by default, the target Term’s TERM_NAME, but can also be any string-valued Attribute (for example a Term Property) of the base Attribute’s target Term. Supported target Attributes are:

· TERM_NAME or NAME (the default),

· TERM_CODE or CODE,

· TERM_ID or ID,

· TERM_STATUS or STATUS,

· NAMESPACE, and

· Term Property Type

Similar considerations as described above to concept-valued forms apply to term-valued forms.

When an export-attributes-statement outputs to an XML file, there are constraints on the export-list. See the Exporting to XML section for further information. The remainder of this section describes considerations of text and Excel export files.

Generally speaking, for text/Excel files the exporter generates one line/row of output for each Concept or Term. In text files, export expression values (the results of export-list elements) are separated by the value of the TQL field delimiter (the first character of the TQL DELIMITER variable); by default the vertical bar or pipe (“|”) character. In Excel, each expression value is placed in its own column cell. If on evaluation, an expression results in more than one value (e.g., when the associated contextual Attribute has repeated values), however, multiple lines/rows per Concept can be generated. Thus, if Synonym Attribute is specified in an export expression and a selected Concept has two synonyms, two lines/rows will be produced, differing only in the value of the Synonym field. If more than one field has repeating values, an appropriate number of unique output records will be produced. (The complexity of this multiplicity is the reason that a given expression can only have one contextual Attribute.)

TQL differentiates between independent and dependent repeated values. If a specification calls for both: MyMap->CONCEPT_NAME and MyMap.MyMapQualifier where MyMap is a Concept Association Type, and there are two occurrences of the Association (each with one Qualifier) in a Concept, only two rows will be created, corresponding to the two occurrences of the independent Attribute MyMap. If one of the MyMap Associations had two instances of MyMapQualifier, on the other hand, three rows would be produced.

It is sometimes required to be able to place multiple (repeated) Attribute values into a single export field. This “grouping” of values can be accomplished by placing the name of the Attribute to be grouped in parentheses. The Attribute’s multiple values are placed in a single export field, with the individual values separated by TQL’s (secondary) group delimiter. This delimiter defaults to the colon “:” but can be overridden by setting a second character in the TQL DELIMITER variable (see The Set Statement section below).

One of the results of grouping is a potential reduction of output rows. Note, however, that some Attribute relationships may be lost, or disrupted, if grouping is specified on multiple related/dependent fields. In the statement below:

FROM [Demo] EXPORT CONCEPT_NAME, (MyProp), (MyProp.Qualifier);

the second group takes precedence in determining the record count. If a Concept has two MyProp Properties, each with two Qualifiers, the output would appear as:

… | PropValue1:PropValue2|Qual12:Qual12

… | PropValue1:PropValue2|Qual21:Qual22

which may not be what was desired. Without grouping, of course, four rows would be output.

The optional SORTED_BY clause specifies alphanumeric sorting of export lines/rows by selected export fields (Attributes). Attributes in the sort-list must be (top-level) contextual Attributes from the expressions in the export-list.

Finally, export operation can be affected by the settings of export-related TQL Variables:

APPEND If true, export lines are appended to an existing export file. Otherwise, a new file is created.

DATA_FORMAT Specifies the format (as a Java SimpleDataFormat string) the format of output dates.

DELIMITER Specifies the primary, and secondary, field delimiters.

EXPORTFILE Specifies the name of the export file.

HEADER If true, the default, a field header line is written to the export file.

LIMIT Limits the number of Concept/Term lines exported. The default value of zero means no limit.

TIME_FORMAT Specifies the format (as a Java SimpleDataFormat string) the format of output times.

UNIQUE If true, only unique output lines are exported.

Values for these variables can be set using a set-variables-statement or by including the TQL Variable name (and optional value) as a modifier on the EXPORT command:

… EXPORT/HEADER=”false”/LIMIT=5/APPEND CONCEPT_NAME, ^Code in Source^;

See Table 6 and the Set Variables Statement section below for further information on these effects.

The For Statement

The for-statement iterates a Concept or Term object over the instances of an attribute. The for-statement is an unrestricted contextual statement; it can be used as a subordinate statement in a collection-statement at any depth. For-statements may not, however, be nested: a for-statement cannot occur within the scope of another for-statement.

There is only one form of the for-statement:

FOR for-attr statement-block

where for-attr is any TQL or DTS attribute that can have multiple values.

TQL attribute filtering operations such as selectors (WITH …) and conditional-statements (IF …), have an “if any” interpretation: if any of the attributes meet the predicate conditions, the Concept or Term is passed to the associated statement-block with all of its attributes. This makes it impossible to perform operations on specific instances of an attribute such as only printing a Synonym attribute if its value begins with “A”.

The for-statement enables attribute-specific operations by passing a Concept or Term object to the associated statement-block that only contains one instance of the specified for-attr:

FROM [^SNOMED CT^] WITH NAME EQUALS “myocardial infarction (disorder)”

FOR SYNONYM

IF SYNONYM EQUALS “MI*” PRINT NAME, SYNOMYM;

The third line of this query is executed once for each Synonym value on the selected Concept. If the Term name of any of these Synonyms begins with “MI”, it is printed.

As shown above, the for-statement is usually used in conjunction with a conditional-statement to perform attribute filtering.

The delete-attributes-statement, set-attributes-statements and update-attributes-statement can also be used with the for-statement to operate on specific instances of attributes:

FROM [Demo]

FOR ^My Prop^

IF ^My Prop^ EQUALS “old*” DELETE ^My Prop^;

Only instances of My Prop whose value begins with “old” will be deleted.

The Output Statement

The output-statement enables message strings to be placed in the log and export streams. The output-statement is, in general, a non-contextual statement and can appear in any query position. Some restrictions do apply to output-statement arguments (see below).

The two forms of the output-statement are:

LOG export-list “;”

PRINT export-list “;”

where export-list is a comma-delimited list of expressions as described above in the Export Statement above. TQL parameters (see the Parameterized Queries section below) can be used in place of the expressions. Individual export-list expressions must be consistent with the usage of the output-statement: if the statement is used in a non-contextual position, e.g., as a top-level statement, then only non-contextual expressions are permitted. When used in a contextual position, any expression form is available.

The first form of the output-statement writes its arguments (as separate strings) into the log file stream. If the query is being run from the TQL Editor, the strings are also written to the Console panel. Each argument is written on a separate line.

The second form writes its arguments to the TQL export file stream. This form can be used, for example, to place explanatory or separation messages in the export file when multiple export-statements are used in a query. No header strings are written by PRINT, but a header can be written by a separate PRINT placed before a collection-statement. The PRINT form includes delimiters between arguments (the DELIMITER TQL Variable) if the export file is text. If the export file is an Excel file, each argument is written to a different cell.

The Set Variables Statement

The set-variables-statement assigns values to variables. The set-variables-statement is a non-contextual statement and can only be used at the “top-level” of a query; it cannot be used as a subordinate statement. See the Set Variables section below for details on statement arguments. Note, however, that the contextual set-attrs-statement (see the Edit Statement section above) accepts both variable and attribute arguments and as such can perform the same functions as the set-variables-statement.

Set Variables

The form of the set-variables-statement is:

SET set-var-list;

where set-var-list is a comma-delimited list of set-var-args:

set-var-arg := variable “=” expression “;”

Both TQL Variables and User Variables may be used in a set-var-arg. As described in the Variable Element section above, TQL Variables are pre-defined and affect processing of TQL statements, while User Variables have names that begin with the percent (“%”) character and are defined by their occurrence in a set-var-arg. Once defined, User Variables can be used in any subsequent expressions. Both TQL Variable and User Variable names are case-insensitive.

SET HEADER = “true”, %PROMPT = “Concept name:”;

Table 6 describes the semantics of each TQL Variable and specifies which statements are affected by each variable (see the Applies To column in Table 6). Values set by a set-var-arg override internal default values, arguments of the TQL Class main method, and values, such as the delimiter, export file and header, that are specified in the TQL Editor GUI. Values set by the set-statement are maintained throughout an instance of the TQL Class and thus may extend across multiple queries when the TQL API is used. Since the TQL Editor instantiates a new TQL instance for every query execution, however, the TQL Variable values are reset at each run.

A shorthand syntax is also available by which TQL Variables can be set in the context of their associated statements. The variables are placed as modifiers on the statement commands. The modifier can just name the variable, in which case the variable’s value is set to “true”, or a specific value can be given:

… EXPORT/HEADER=”false”/UNIQUE/EXPORT_FILE=”text.txt” …

The availability of a specific modifier on a command is statement-dependent; not all TQL Variables can be used on all commands. See each statement description for details. Note that the scope of these modifier-set values is limited to the statement itself, i.e., after statement execution, the previous values of all TQL Variables are restored.

Parameterized Queries

TQL parameters are special elements in queries that can be replaced by user-entered values supplied at run-time. When a query containing parameters is run in the TQL Editor, a Parameter Entry Panel is shown that prompts for the parameter values. (See the TQL Editor section below for further information on the Parameter Entry Panel.) Entered values then replace the parameter elements in the query. A separate application, the TQL Commander, is also available for running parameterized queries. See the TQL Commander User Guide for further information.

Parameters can be used in place of any expression-element in a TQL query. (The only exception to this rule is that parameters cannot replace elements in a parameter-statement or constrain-statement. See details below.) The form of a parameter is the parameter’s name surrounded by the at-sign (@):

FROM [“SNOMED CT”] WITH CONCEPT_NAME EQUALS @Concept Pattern@

EXPORT CONCEPT_NAME;

The parameter-statement and constrain-statement support the use of parameters in queries. Both statements are non-contextual statements and can only be used at the “top-level” of a query; they cannot be used as a subordinate statement. The parameter-statement is required to declare use of a parameter. A parameter-statement can be placed anywhere in the query, but it must precede any use of the statement’s parameter(s) in other statements. Each argument in the statement declares a parameter and, optionally, its type and help text.

parameter-statement := PARAMETER parameter-list “;”

where parameter-list is a comma-delimited list of arguments of the form:

parameter [ “:” [parameter-type] [ “:” help-literal ]

The optional parameter-type argument provides direction to the Parameter Entry Panel for validation of parameter values. The following parameter-types are supported:

CONCEPT The parameter value must be a namespace-qualified name of an existing Concept: “North[States of the Union]”

TERM The parameter value must be a namespace-qualified name of an existing Term: “Ole Miss[States of the Union]”.

INTEGER Validates the entry value to an integer.

NUMBER Validates the entry value to a number.

BOOLEAN Validates the entry value to “true” or “false”.

FILE No validation, but shows a Browse button in the parameter’s Parameter Entry Panel row for selecting a file.

STRING No validation. The default parameter-type.

The optional help-literal argument provides a help string to the Parameter Entry Panel.

The TQL Parameter Entry Panel uses information from the parameter-statement and the constrain-statement (see below) to construct an entry field and validate the entered value. The prompt label for the field is taken from the name of the parameter. The panel constructs a default help string based on the parameter-type and any associated constraints, but this default can be overridden by specifying a help-literal in the parameter-statement argument. The order of appearance of parameter fields in the Parameter Entry Panel is the order in which the parameters are declared in parameter-statements.

The following parameter-statement would need to precede the example export-statement above:

PARAMETER @Concept Pattern@::”Enter a concept name search pattern.”;

Note: Parameters cannot be used to replace any help-literals in parameter-statements.

The screen shot below shows the Parameter Entry Panel for this parameter-statement:

The TQL Parameter Entry Panel can perform further validations (tests) on input values beyond those associated with the parameter-type based on the presence of constrain-statements in the query:

constrain-statement := CONSTRAIN parameter TO constrain-list “;”

The constrain-list is a comma-delimited list of arguments of the form:

binop operand

where binop is any of the binary selector operators shown in Table 3 and operand is the right operand shown in the Table. Each of the arguments in the constrain-statement specifies a validation that must be satisfied by any entered value for the designated parameter. Value interpretations are performed as required by the specified binop, e.g., numeric interpretation for an arithmetic operator, or Concept/Term context membership for a MEMBER_OF operator. For the MEMBER_OF operator, the TQL Parameter Entry Panel supports implicit “starts with” (wildcard) lookups in the specified context.

The constrain-statement can appear anywhere in the query after the associated parameter’s declaration. All constraints are applied when a value is entered. There is no other dependence on the position of the constraint-statement.

The constrain-statement below could be used in the example export query:

CONSTRAIN @Concept Pattern@ TO NOT_EQUALS “*” ;

Note: Parameters cannot be used to replace any operands in a constrain-statement.

Finally, note that the parameter-statement and constrain-statement are declarative statements used by the TQL Editor (and TQL Commander) subsystems. They are not processed at run-time. In particular, the constrain-statement will not validate parameter replacements when queries are run via methods in the TQL Class.

Exporting to XML

A TQL XML export file contains a description of DTS objects associated with a designated Namespace, Subset, or ConSet. If created by an export-concepts-statement, export-subset-statement or export-namespace-statement, all requested objects of the specified context are exported formatted according to the associated XML schema definition.

If created by an export-attributes-statement, only the selected Concepts and specified export-attributes (along with their associated attribute Types) are exported. Because of the highly structured format of an export XML file, restrictions have been placed on the types of export-attributes that may be used. In general, the export-attributes should be thought of simply as the set of objects to be exported, rather than as describing an output format or order.

Specifically, the following rules must be adhered to in the export-attributes-statement when an export is directed to an XML file:

· Export attribute keywords (see Table 2) are not permitted in the export-attributes. Note, however, that full definitional information for the set of selected Concepts, e.g., Namespace, name, code and id, are always included in the export, and individual Concept Attributes, e.g., Association Types and Property Types, can be specified.

· Qualified Property Types and Association Types are permitted as display attributes. These add the designated Qualifier to the export set.

· Functions are not permitted.

· Any SORTED_BY clause is ignored.

The TQL Editor

TQL queries can be created, maintained, saved, and run from the TQL Editor. The Editor can be started standalone by running TQLEditor.bat, or within the DTS Editor by clicking on the TQL icon in the icon bar or selecting Tools|TQL Editor from the menu bar. Figure 1 below shows the layout of the TQL Editor. The Title Bar gives information on the status of the current query. The Menu Bar gives access to all TQL functions, while the Icon Bar provides single click access to frequently-used features. The upper Editor Area provides a Notepad-like area for creating and editing TQL queries. See the Creating and Editing Queries section below for full details. The middle Info Area has two tab panels: the Console panel shows status and diagnostic messages, while the Output panel is an optional destination for query output. Drag of selected query Concepts from the Output panel is supported. See the Using the Output Panel section below. Finally, the bottom Output Specification Area is used to select the destination and parameters for query output. See the Specifying Output Location section below.

Figure 1 – The TQL Editor

TQL Menus

The File Menu

The File menu contains options for working with TQL files and setting TQL preference values:

New Clear the Editor Area and current file name in preparation for a new query.

Open Query Open a file browser dialog to select a saved query.

Save Query Save the current query in the current file.

Save Query As Open a file browser dialog to save the query into a new file.

Connect Connect to a DTS Server (only present when TQL is running in standalone mode).

Disconnect Disconnect from a DTS Server (only present when TQL is running in standalone mode).

Preferences Open the TQL Preferences dialog. See TQL Preferences below.

Exit Close the TQL window. If the current query has been modified, and not saved, a warning dialog is shown.

Edit Menu

The Edit menu contains options for editing text in the Editor Area:

Undo Undo the last edit operation.

Cut Place the selected query text in the Clipboard and erase from the query.

Copy Place the selected query text in the Clipboard.

Paste Paste the text contents of the Clipboard into the query at the cursor position.

Clear Erase all the text in the Editor Area.

Select All Select all the text in the Editor Area.

Query Menu

The Query menu contains options for processing queries in the Editor Area:

Parse Query Parse the current query.

Run Query Run (execute) the current query.

Stop Query Stop the currently executing query.

Help Menu

The Help menu contains options for accessing TQL information:

Open TQL User Guide Opens the TQL User Guide (this document).

Open Attribute Chooser Opens the TQL Attribute Chooser dialog.

Open RegEx Helper Opens a TQL RegEx Helper dialog for testing Regular Expressions.

About TQL Editor Opens the About TQL dialog.

TQL Preferences

The TQL Preferences option permits selection of preference items when running TQL:

Number Output Lines When selected, lines in the Output tab of the TQL Info Area will be numbered.

Test for V3 Query When selected, parsed queries will be scanned for non-V4 attribute delimiters. This enables the rewriting (conversion) of the query to V4 format. After parsing, non-V4 queries will show an informational Rewrite Query dialog. From this dialog, a rewrite operation can be rejected, the query can be rewritten, or the query can be rewritten and subsequent queries can be automatically rewritten (the dialog will be suppressed). To reinstate display of the dialog after suppression, unselect then reselect Test for V3 Query.

Note: This option should be deselected after V3 queries have been converted. Some valid V4 queries will report parse errors if V3 testing is enabled.

Show Header Line When selected, enables display of the TQL Header in the Editor Area. See Loading and Saving Queries below for further information on the TQL Header line.

The state of these options is persisted in the TQL configuration file.

Creating and Editing Queries

The Editor Area is used to create and edit TQL queries. It provides standard Windows editing capabilities (similar to those in Notepad). Editing functions are available from the Edit menu (Undo, Cut, Copy, Paste, Clear, and Select All) and the Icon Bar (Undo, Cut, Copy, and Paste). Standard keyboard and mouse shortcuts are also supported.

To facilitate the entry of DTS Attribute names, the TQL Editor also provides an Attribute Chooser panel (shown at right). To open the panel, right click in the Editor Area. The popup menu has four options: Open Attribute Chooser,

Open RegEx Helper, Insert Create Template and Insert Export Template. The first opens the Attribute Chooser Panel, the second opens the RegEx Helper Panel (described in the Getting Help section below), and the third and fourth insert the associated “template” query into the Editor Area. In the Chooser panel, select the desired Namespace, Subset, ConSet or TermSet and then Attribute Type to show the available Attributes. Attribute Types include TQL Attributes (shown in the example) and TQL Variables, as well as DTS Attributes. In the figure above, TQL Attributes are marked with “E” for Export Attributes and “S” for Selector Attributes. To insert any Attribute name (or Namespace, Namespace Version, Authority, Subset, Subset Version, ConSet or TermSet name) into the query, drag the name from the Chooser panel to the desired position in the Editor Area (the caret will track the drag position). You can also double click on the element name to replace the current Editor selection (or simply insert at the caret position if there is no selection). The text inserted is the full quoted, namespace qualified, representation of the Attribute.

When the TQL Editor is run as part of the DTS Editor, a Concept (name) can similarly be dragged from other DTS Editor panels into the TQL Editor to populate a value element.

Loading and Saving Queries

Queries can be saved to files (with a “.tql” extension) via the Save Query As option (available in the File menu) and retrieved by the Open Query option (in the File menu and Icon Bar). The name of the currently open query file is show in the TQL Editor Title Bar, along with a modified flag (“*”) if appropriate. If the query has not yet been saved, the file name is shown as “(blank)”. A Save option (available in the File menu and Icon Bar) rewrites the query into the current file.

Whenever a query is saved, a TQL Header is written at the top of the file. The header is a comment line that gives the TQL version, user and saved date/time:

/* TQL V4.0 Query saved by dtsadmin on 2 Sep 2014 21:08:12 */

Visibility of the header line in the Editor Area can be turned on or off by the Show Header Line item in the File|Preferences menu.

Running Queries

The Query menu options (and associated Icon Bar items) provide the capability to parse (test/compile) and run queries. Before running (or even parsing) the query, the TQL Editor must, however, be connected to a DTS server. If the TQL Editor is being run as a plug-in to the DTS Editor, this occurs as part of the parent application. If the TQL Editor is being run “stand-alone”, on the other hand, connection must be established explicitly. In this case, Connect and Disconnect options are available in both the TQL Query menu and Icon Bar. The Connect option opens a dialog box requesting server connect parameters.

The syntactic correctness of a query can be tested by selecting the Query|Parse Query menu item (or clicking on the Parse Query icon). The query will be compiled and any errors will be reported in the Console panel of the Info Area. An erroneous token will be highlighted in the Editor Area. To parse and run the query, select the Query|Run Query menu item or click on the Run Query icon. If the query is syntactically correct, it is run and the export output is directed (by default) to the Output panel of the Info Area (see Specifying Output Location below). During the run, status and diagnostic messages are written to the Console panel. (Status messages include the elapsed time of the query.) If it is desired to terminate the query run, select the Query|Stop Query item or click on the Stop icon. This will terminate the query operation, within the procedural granularity provided by the DTS API.

Running Parameterized Queries

When a query is run, if the query has parameters, the TQL Editor opens a Parameter Entry Panel (see example below) for input of the parameters’ values.

The panel displays one line for each parameter in the query. The order of the parameters in the panel is the order in which the parameters are declared in parameter-statements. The line’s prompt is the name of the parameter. The parameter value should be entered into the text field. If the parameter-type is CONCEPT, a small “C” is shown at the right end of the field. This means that the field accepts Drag and Drop of DTS Concepts from other DTS Editor panels. Hover the mouse over the question mark icon to see a help string for the value. A default help string is computed by the panel from the parameter’s type and context, but a user-defined string can be specified in the parameter’s parameter- statement. Finally, if the parameter-type is FILE, a Browse button is present. Click this button to open a file browser for selection of an existing file.

Hit ENTER to accept the value in a field. The Parameter Entry Panel then applies any implicit (parameter-type) or explicit (constrain-statement) validation rules. After all values have been entered, click on Apply to run the query with these values substituted for the parameter elements. Alternately, click on Clear to clear all existing values, or Cancel to terminate query processing.

Specifying Output Location

By default, the query export output is written to the Output panel in the Info Area. To write the output to a file, uncheck the Send output to info area checkbox in the Output Specification Area and enter an output file name (or click on the Browse button). The output file can be XML (.xml), ASCII text (.txt), or Excel (.xls, .xlsx). See the Exporting to XML section above for details and specific constraints on XML output,

For Excel files, a special syntax is available to direct output to a specific sheet of the file. The form:

C:\Apelon\MyFolder\concepts.xlsx:First

will cause the output to be written to a new sheet in concepts.xlsx named First. This sheet syntax is only available for .xls and .xlsx files.

For output to a text or Excel file (or the Output panel), check the Include data header checkbox (see Figure 1 above) to include an initial header row, and, if a text output, enter the desired field delimiter character(s) in the delimiter text box. The default field delimiter is the vertical bar (“|”) and default group delimiter is the colon (“:”). Alternately, the values of these parameters can be specified using the TQL EXPORTFILE, HEADER, and DELIMITER variables (see The Set Statement section above for further details).

Using the Output Panel

In addition to displaying the output from a TQL Query, the Output panel can be used as a copy and/or drag source. The example below shows a query result on the right side of the panel with (optional) line numbers and Concept icons on the left. (Numbering of output lines is controlled by a TQL Preference item. See TQL Preferences above.) Text can be selected and copied from the right side, while Concept objects can be independently selected and dragged from the left side. A ToolTip on the Concept icon gives the name of the Concept.

Note: When the UNIQUE variable is applied to an output query, the Concept associated with an output row is one of the Concepts having the unique attribute value. The Concept selected is unspecified.

Getting Help

The Help menu item provides access to this User Guide and an About screen for the TQL Editor. The User Guide and About are also available in the DTS Editor’s Help menu.

Also on the TQL Help menu is a link to the TQL Regular Expression Helper Panel. This panel provides a testing template and documentation for using Regular Expressions. See Appendix B for further information on Regular Expressions and the Regular Expression Helper Panel.

Additional Query Considerations

TQL includes a rich syntax with which to write queries. Often, this means that a query for a given result, e.g. an export, can be written in multiple ways. This section provides suggestions on reducing errors and improving performance of specific query structures.

A common source of errors is confusion on Attribute value equality in a selector. String equality is represented by the EQUALS keyword, while the equals character “=” corresponds to numeric equality based on calculation of the numeric head. Use of EQUALS (including with wild cards) is typically much more efficient (faster) than numeric equality since the former takes advantage of internal DTS methods while the latter requires an application level search over all Concepts in the current context. As a reminder, string operations have word operators (like EQUALS and MATCHES) while numeric operations use punctuation operators (“=” and “>”).

Some select-concept-op operators duplicate functionality available in other selector operations. As an example, the selectors:

PARENT EQUALS “My Concept” and

CONCEPT CHILD_OF “My Concept”

are equivalent. The two forms are implemented identically. The choice of selector form should be made based on query clarity.

One way to think of selector combinations is that the result of a selector is an internal ConSet. Thus the selectors expression selectorA OR selectorB results in the computation of the union of two ConSets. Similarly selectorA AND selectorB results in an intersection computation. In general, the TQL engine executes each selector independently. Thus this expression:

myprop > 3 AND myprop < 10

causes two complete searches of every Concept in the current context.

As mentioned in the discussion of selectors in The Terminology Query Language section, searches over every Concept in a large context, such as SNOMED CT, may result in failed queries due to memory overrun errors on the DTS server or client. For some queries, these errors can be avoided by use of specific query techniques. First, use of an explicit ConSet can remove a potential problem. Thus, if it is desired to see all ICD-9-CM concepts in the PROCEDURES tree that have a code less than “80.”, one could use:

FROM [^ICD-9-CM^] WITH ANCESTOR EQUALS “PROCEDURES [00-99.99]”

AND ^Code in Source^ < 80 EXPORT … ;

The problem is that the second selector must individually search all Concepts in ICD-9-CM, potentially resulting in a fatal error. One solution is to first create a ConSet as:

CREATE ICDprocs FROM [^ICD-9-CM^]

WITH ANCESTOR EQUALS “PROCEDURES [00-99.99]”;

This query is safe since the ANCESTOR EQUALS … selector is optimized by the DTS API (see Table 4). Now the following export query will only search Concepts in the smaller named ConSet, removing the potential error condition:

FROM ICDprocs WITH ^Code in Source[ICD-9-CM]^ < 80 EXPORT … ;

In fact, however, the original query would likely not result in a memory error because the TQL interpreter optimizes AND operations in most cases. Specifically, the selector on the right of an AND operator is applied to the (internal) ConSet resulting from the left selector of the AND rather than the current context, performing an implicit AND. This optimization can be performed unless the selector uses the Ancestor or Parent attribute. Thus the query can be safely executed. Note that reversing the two selector elements loses this protection, since the new left selector (^Code in Source^ < 80)does require a full Concept search. The solution for this structure would be to use an explicit ConSet as described earlier.

Next, consider a query that looks for all “active” ingredient Concepts in NDT-RT:

CREATE ActiveIngredients FROM [^NDF-RT^] WITH ^Level^ equals “Ingredient” AND ANCESTOR NOT_EQUALS “TO BE DELETED INGREDIENT PREPARTATIONS”;

Since Ancestor is used in the right hand selector, the AND optimization cannot be applied. With the full-concept-search NOT_EQUALS operator in the selector, a memory error could be generated. The solution is to use the NOT_AND connector with the DTS-enabled EQUALS selector operator:

CREATE ActiveIngredients FROM [^NDF-RT^] WITH ^Level^ equals “Ingredient” AND_NOT ANCESTOR EQUALS “TO BE DELETED INGREDIENT PREPARTATIONS”;

This query should execute successfully.

Finally, remember that qualifiers are not individually indexed in DTS. Thus any query selector which contains a Qualifier Type must retrieve all the instances of the independent Attribute (Property Type or Association Type) and then test any associated qualifiers as specified in the selector.

Using the TQL Class

In addition to using the TQL Editor, TQL queries can be executed in two ways: in a standalone, or “batch” mode, using a batch file such as TQL.bat (found in the DTSInstall\bin\tqleditor folder), or directly from Java applications using the TQL Class. Use of either of these methods avoids GUI overhead which can improve query processing time.

TQL.bat provides a simple mechanism to execute previously developed queries as part of routine production processes. TQL.bat simply executes the main() method of the TQL Class. Use of the TQL.bat, or an equivalent batch file, ensures that the DTS context, e.g. classpath variable, are set up appropriately.

TQL.bat passes required parameters such as connection values and file names to the TQL Class via position-independent key word/value pairs. If no parameters are provided on the TQL command, the program will prompt for values from the console. The available parameters are:

-host:hostname Required. The name of the DTS host (server) system.

-port:portnumber Required. The port number of the DTS host (server) system.

-instance:instance Required. The name of the DTS Server instance on the app server.

-user:username Required. The application server username.

-psw:password Required. The application server user password.

-query:filename Required. The name of the TQL query file. Must have an extension of tql.

-output:filename Optional. The name of the output file. Must have an extension of txt, xml,xls, or xlsx.

-delim:delimiter Optional. The one or two character delimiter. The first character is the field delimiter and the second character (if present) is the group delimiter. If missing, TQL defaults will apply “|:”.

-header:header Optional. “Y” to include a header line in export files, or “N” otherwise. If not present, a header is written.

-log:filename Optional. The name of the log file to be used. If not present, the default TQL log file name, TQL.log, is used.

An example TQL command line is shown below:

TQL -user:manager -psw:password -host:localhost -port:4447

-instance:dtsjboss -query:myquery.tql -output:export.txt

-log:”demo log.log”

Note the use of quotes around the log file parameter value since the value contains a space. Quote marks can be used around any value but are required if the value contains a space.

For information on using the TQL Class directly by a Java application see the TQL Javadoc file in the DTSInstall\bin\tqleditor folder.

Table 2 – TQL Attribute Keywords

Attribute Name | Usage | Description
CONCEPT | EFS | The Concept itself.
CONCEPT_NAME | EFS | The Concept Name.
CONCEPT_CODE | EFS | The Concept Code.
CONCEPT_ID | EFS | The Concept Id.
CONCEPT_STATUS | EFS | The Concept Status.
TERM | EFS | The Term itself.
TERM_NAME | EFS | The Term Name.
TERM_CODE | EFS | The Term Code.
TERM_ID | EFS | The Term Id.
TERM_STATUS | EFS | The Term Status.
NAME | EFS | Alias for CONCEPT_NAME or TERM_NAME.
CODE | EFS | Alias for CONCEPT_CODE or TERM_CODE.
ID | EFS | Alias for CONCEPT_ID or TERM_ID.
STATUS | EFS | Alias for CONCEPT_STATUS or TERM_STATUS.
NAMESPACE | EFS | The name of the Concept’s or Term’s Namespace.
VERSION_NAME | EFS | The name of the Version for a Concept or Term snapshot.
VERSION_DATE | EFS | The date of the Version for a Concept or Term snapshot.
PREFERRED_NAME | EFS | The Preferred Term (Synonym) of the Concept. Returns the empty string if there is no preferred Synonym.
RESOLVED_NAME | EFS | The Preferred Name if one exists, otherwise the Concept Name
QUALIFIED_NAME | EFS | The ConceptName followed by the Namespace in brackets
PRIMITIVE | EFS | The Primitive Attribute of a Concept in an Ontylog or Ontylog Extension Namespace. The value is “Primitive” or “Defined”.
SYNOMYM | EF | The Concept’s Synonyms.
PROPERTY | EF | The Concept’s or Term’s Properties.
ASSOCIATION | EF | The Concept’s or Term’s Associations.
ROLE | EF | The Concept’s Roles.
KIND | EFS | The name of the Concept’s Kind.
SUBSET | EFS | The name of the Subsets in which the Concept participates.
DEFINING_CONCEPT | EFS | The Defining Concepts associated with a Concept in an Ontylog or Ontylog Extension Namespace.
CHILD | EFS | The Concept’s Children (Subconcepts). For Thesaurus Namespaces, the inverse AXIS association is used.
DESCENDANT | EFS | The Concept’s Descendants (recursive Subconcepts). For Thesaurus Namespaces, the AXIS association is used.
PARENT | EFS | The Concept’s Parents (Superconcepts). For Thesaurus Namespaces, the AXIS association is used.
PARENT_PLUS | S | Same as above but collection includes the Parent Concept.
ANCESTOR | S | The Concept’s Ancestors (recursive Parents). For Thesaurus Namespaces, the AXIS association is used.
ANCESTOR_PLUS | S | Same as above but collection includes the Ancestor Concept.

Notes: E = valid as export attribute F = valid as function argument S = valid as selector attribute

Table 3 – TQL Selector Operators

Operator String | Right Operand Type | Decsription
MEMBER_OF | context | Referent Concept is a member of the designated context.
NOT_MEMBER_OF | context | Referent Concept is not a member of the designated context.
CHILD_OF | Concept name literal | Referent Concept is a proper child (Subconcept) of the Concept referenced in the literal. Not permitted in collections whose context is a ConSet.
NOT_CHILD_OF | Concept name literal | Referent Concept is not a proper child (Subconcept) of the Concept referenced in the literal. Not permitted in collections whose context is a ConSet.
CHILD_OF_PLUS | Concept name literal | Same as CHILD_OF but referent Concept can also be equal to the Concept referenced in the literal. Not permitted in collections whose context is a ConSet.
NOT_CHILD_OF_PLUS | Concept name literal | Same as NOT_CHILD_OF but referent Concept can also be equal to the Concept referenced in the literal. Not permitted in collections whose context is a ConSet.
DESCENDANT_OF | Concept name literal | Referent Concept is a descendant (recursive Subconcept/Child) of the Concept referenced in the literal. Not permitted in collections whose context is a ConSet.
NOT_DESCENDANT_OF | Concept name literal | Referent Concept is not a descendant (recursive Subconcept/Child) of the Concept referenced in the literal. Not permitted in collections whose context is a ConSet.
DESCENDANT_OF_PLUS | Concept name literal | Same as DESCENDANT_OF but referent Concept can also be equal to the Concept referenced in the literal. Not permitted in collections whose context is a ConSet.
NOT_DESCENDANT_OF_PLUS | Concept name literal | Same as NOT_DESCENDANT_OF but referent Concept can also be equal to the Concept referenced in the literal. Not permitted in collections whose context is a ConSet.
EQUALS | String literal (wildcards allowed) | String value of Attribute equals the literal.
NOT_EQUALS | String literal (wildcards allowed) | String value of Attribute does not equal the literal.
FOLLOWS | String literal | String value of the Attribute lexically follows the literal.
PRECEDES | String literal | String value of the Attribute lexically precedes the literal.
EXISTS | None | At least on instance of the Attribute exists on the referent Concept. Same as EQUALS *
NOT_EXISTS | None | The Attribute does not exist on the referent Concept. Searches across the full context.
MATCHES | Regular Expression string literal | Attribute value matches the RegEx. See Appendix B for detailed RegEx information.
NOT_MATCHES | Regular Expression string literal | Attribute value does not match the RegEx. See Appendix B for detailed RegEx information.
IN_RANGE | Numeric literal “:” numeric literal | Numeric interpretation of the Attribute value lies between the lower limit and upper limit (inclusive)
NOT_IN_RANGE | Numeric literal “:” numeric literal | Numeric interpretation of the Attribute value does not lie between the lower limit and upper limit (inclusive)
= | Numeric literal | Numeric interpretation of the Attribute value equals the numeric literal.
<> | Numeric literal | Numeric interpretation of the Attribute value does not equal the numeric literal.
< | Numeric literal | Numeric interpretation of the Attribute value is less than the numeric literal.
<= | Numeric literal | Numeric interpretation of the Attribute value is less than or equal to the numeric literal.
> | Numeric literal | Numeric interpretation of the Attribute value is greater than the numeric literal.
>= | Numeric literal | Numeric interpretation of the Attribute value is greater than or equal to the numeric literal.

Table 4 – TQL Selector Attribute/Operator Limitations

Attribute | Operators
| Concept Op | EQUALS & EXISTS | NOT_EQUALS, PRECEDES, FOLLOWS, MATCHES, & NOT_MATCHES | NOT_EXISTS | Numeric
CONCEPT/TERM | None | None | SW, FCS | NA | FCS, NH
CONCEPT_NAME & TERM_NAME | NA | None | SW, FCS | NA | FCS, NH
CONCEPT_CODE, CONCEPT_ID, TERM_CODE & TERM_ID | NA | SW | SW, FCS | NA | FCS, NH
CONCEPT_STATUS & TERM_STATUS | NA | SW, FCS | SW, FCS | NA | FCS, NH
PREFERRED_NAME | NA | SW | SW, FCS | FCS | FCS, NH
PRIMITIVE | NA | FCS | FCS | FCS | FCS, NH
KIND | NA | FCS | FCS | FCS | FCS, NH
VERSION_NAME & VERSION_DATE | NA | FCS | FCS | FCS | FCS, NH
SUBSET | NA | FCS | FCS | FCS | FCS, NH
DEFINING_CONCEPT | None | FCS | FCS | FCS | FCS, NH
PARENT, PARENT_PLUS, CHILD, DESCENDANT, ANCESTOR & ANCESTOR_PLUS | None | None | SW, FCS | FCS | FCS, NH
Synonym Types | NA | None | SW, FCS | FCS | FCS, NH
Property Types | NA | None | SW, FCS | FCS | FCS, NH
Role Types | None | None | SW, FCS | FCS | FCS, NH
Concept Association Types | None | None | SW, FCS | FCS | FCS, NH
Functions | NA | FCS | SW, FCS | NA | FCS, NH

Notes:

NA = Not Applicable or Not Allowed

SW = Case insensitive, Simplified Wild cards: foo, *foo, *foo*, foo* only

FCS = Full Concept Search in context; performance implications

NH = Comparison on Numeric Head

Table 5 – TQL Functions

Fnction Name | Description
LENGTH | Returns the string length of the Attribute argument.
COUNT | Returns the number of instances of the Attribute argument on the selected Concept.

Table 6 –TQL Variables

Variable | Applies To | Description
APPEND | EXPORT | If “Yes” or “True”, causes export data to be appended to the export file. A new version of the file is not created. The default value is “False”.
AXIS | Hierarchy operations and DELETE_TREES | The name of the Concept Association (or Role in Ontylog Namespaces), used as the parent-to-child “axis” for hierarchy operations. The default is the null string, corresponding to theSuperconcept/Subconcept relationship for Ontylog Namespaces and the “Parent Of” association for Thesaurus Namespaces. The AXIS value can have the “INV” prefix to designate that the actual association points from child to parent.
DATE_FORMAT | expression | The Java SimpleDateFormat format string for outputting dates. The default is “dd-MMM-yyyy”. See Appendix C for detailed format descriptions.
DELIMITER | EXPORT | The two character delimiter object used in text export operations. The first character is the field delimiter and the second (optional) character is the group delimiter. The TQL default is the vertical bar or pipe “|” character for the field delimiter and the colon (“:”) for the group delimiter. Overrides the TQL Editor Field delimiter for text textbox and the delimiter argument on the TQL command line.
EXPORTFILE | EXPORT | The name of the desired export file. Overrides the Editor Output file textbox and the output_file_name argument on the TQL command line.
HEADER | EXPORT | “Yes” or “True” to include a header line in the output. The TQL default is “Yes”. Overrides the TQL Editor Include data header checkbox and the header argument on the TQL command line.
LIMIT | EXPORT | If non-zero, limits the number of concept lines exported.TQL default is “0” which means no limit.
PRUNE_TERMS | DELETE_CONCEPTS DELETE_TREES | “Yes” or “True” to delete orphan Terms when Concepts or Synonyms are deleted. The TQL default is “No”.
RETAIN_HEAD | DELETE_TREES | “Yes” or “True” to retain the named, “head”, concepts when trees are deleted. The TQL default is “No”.
SIZE | NA | A read-only variable set to the size of the previous collection.
TIME_FORMAT | expression | The Java SimpleDateFormat format string for outputting times. The default is “h:mm a”. See Appendix C for detailed format descriptions.
TYPEDEFS | EXPORT_CONCEPTS | “Yes” or “True” to include Type Definitions in the export. The TQL default is “False”.
UNIQUE | EXPORT | If “Yes” or “True”, only unique lines are exported. Duplicates are not exported. The TQL default is “False”.

Table 7 –Special Symbols for Use in Set/Update Literal Values

Code | Replaced With
@D or @d | The current date. Uses the DATE_FORMAT TQL Variable.
@T or @t | The current time. Uses the TIME_FORMAT TQL Variable

Notes: The values returned from the above symbols are both computed from the current date/time (Java Date()). The separation into a “date” and a “time” is conventional. The actual values returned are completely determined by the format strings.

Revision History

Version 1.0 Initial release.

Version 1.1 Bug fixes. About dialog box. Local Concept Sets (Consets). CREATE statement. AND optimization. AND_NOT operator. Removed restriction on use of numeric operators. Copy and Select All supported in all text panels. Explicit field delimiter and optional header line to TQL Editor and TQL.

Version 1.2 Support for DTS 3.4. TQL Comments. Subsets as contexts. Synonym Type support added in selector and export expressions. Elapsed time in console status messages. User Guide available in DTS Editor Help Menu and TQL Editor Help Menu. XML output and export-xml-statement. Concept collection process modified to favor collection of large Concept collections over speed (export CASD fetch is delayed). Export Wizard removed. See specific XML export limitations in the Export XML Statement section.

Version 1.3 Support for Ontylog and Ontylog Extension Namespaces (including Defined View variables). Attribute category postfix syntax added.

Version 2.0 Create-statement for Subsets, delete-statement and edit-statement added. Special value codes (@D and @T) added. TQL icon in DTS Editor Icon Bar.

Version 2.1 Minor changes to XML export formats to accommodate addition of XML Schemas.

Version 2.2 New capabilities added for XML exports: fielded exports (via the export-attributes-statement) can be written to XML files, and the export-concepts-statement supports Ontylog Namespaces, Subsets, and Consets as contexts. The export-subset-statement added for Subset-consistent exports of Subsets. Term Properties and Term Associations are now exported on the export-namespace-statement. DTSPropertyTypes are available as a concept-string on exports. An argumented form of the delete-concepts-statement has been added, as has a delete-trees-statement for deletion of concept hierarchies.

Version 3.0 Major update. Multi-statement queries. LOG, PRINT and SET statements as well as new statement forms. TQL variables and modifiers. New selector operators and TQL Attributes. COUNT and LENGTH functions. Encoded expressions. Chooser attributes are now sorted. TQL main() supports socket server connections. See the V3 Release Notes for further details.

Version 3.1 Export to Excel files. CREATE_CONCEPTS and CREATE_TERMS statements. Optional attribute values on delete-attributes-statement. delete-attributes-statement and set-attributes-statement support Synonyms (including PRUNE_TERMS on delete). Grouped export attributes. RegexHelper panel.

Version 3.2 TQL parameters and associated TQLCommander application. Parameter-statement and constrain-statement. Multiple arguments supported in output-statement. IN_RANGE operator added. Qualifier options on delete-attributes-statement and set-attributes-statement. Encoded form supports fixed attributes.

Version 3.3 The delete-attributes-statement and set-attributes-statement support Defining Roles and Defining Concepts for Extension Namespaces. Bugs fixed in Extension Namespace hierarchy queries. GROUP qualifier for Roles. FOLLOWS and PRECEDES string operators added. The output panel (optionally) displays line numbers and supports drag of Concepts. The File|Preferences menu option selects whether or not output lines are numbered. XML exports of Terms, Term Properties and Term Associations include Term Ids to enable disambiguation of Terms with identical names. The TQL Reference Guide pocket trifold added to distribution.

Version 3.4 Interim update for DTS V4.0. Changes to TQL class constructors and TQLEditor.bat parameters.

Version 4.0 Major update for DTS V4.0. New capabilities include Term Collections, User Variables, User Functions, and Value Expressions. Version and date qualification of Namespace and Subset Contexts. Status support in Collections. Creation and deletion of Namespaces and Authorities. DATE_FORMAT, TIME_FORMAT and SIZE TQL Variables. New XML export formats support Namespace Properties, Version Properties, and Subset Properties, Subset Version Properties and Subset Expression (compatible with Import Wizard 4.1). Line numbering and Concept/Term drag from Output panel.

Version 4.1 Query header line, block statements, and conditional (IF, ELSEIF, ELSE) statements added. NAME, CODE, ID, STATUS, PROPERTY, ASSOCIATION, and ROLE TQL Attributes created. SET, PRINT, and LOG arguments extended. User Guide restructured and BNF updated.

Version 4.2 Bug fixes. FOR statement added for iterating over attribute instances. Anonymous attributes introduced for conditional, export and output statements. Anonymous attributes can be used in Subset, ConSet, TermSet and All Namespace contexts.

Version 4.3 Bug fixes. DTS Layout support updated. DESCENDANT keyword added as a predicate and export attribute.

Version 4.4 Bug fix for support of Extension Roles in XML exports of Extension Namespaces. Import requires Import Wizard Version 4.4.

Version 4.5 Update for DTS Version 4.5. Validators supported for Property and Qualifier edits. XML exports include Validators, Kinds, Subset Version Properties, and non-local Synonyms. New export xsds to support Ontylog Namespace exports. Ontylog imports require Import Wizard Version 4.5. Ontylog and Ontylog Extension Namespaces can be created. Kinds are listed in Attribute Chooser. Ability to specify a target “sheet” for Excel output.

Version 4.5.1 XML Namespace exports support Defined Role Groups.

Appendix A - Terminology Query Language Reference

This Appendix gives a formal definition of TQL syntax in a simplified BNF grammar. TQL elements are in italics. Keywords are shown in upper case for clarity but are case-insensitive in TQL. Elements are separated by whitespace. The symbol “|” denotes alternate elements while “[ … ]” denotes optional elements. Literals may be enclosed in single or double quotes and standard Java character escapes for single quote, double quote, tab and slash are supported. The caret (“^”) can also be escaped so that this character can appear in attribute literals.

query := statement [ query ]

statement := collection-statement |

conditional-statement |

constrain-statement |

create-context-statement |

delete-context-statement |

edit-statement |

export-statement |

for-statement |

output-statement |

set-statement |

parameter-statement

statement-block := statement

“{“ statement-list “}”

statement-list := statement [ statement-list ]

collection-statement := FROM [ collection-mods ] collection [ statement-block ] “;”

collection-mods := collection-mod [ collection-mods ]

collection-mod := “/” CONCEPTS |

“/” TERMS |

“/” STATUS “=” status

status := ALL |

ACTIVE |

INACTIVE |

DELETED

collection := ALL WITH selectors |

context [ WITH selectors ]

context := “[“ namespace [ “:” version-name ] “]” |

‘[‘ namespace [ “#” version-date ] “]” |

“{“ subset [ “:” version-name ] “}” |

“{“ subset [ “#” version-date ] “}” |

conset |

termset

version-name := string-literal

version-date := string-literal

selectors := selector |

selectors log-op selectors |

( selectors )

log-op := AND | OR | AND_NOT

selector := select-attribute unop |

select-attribute select-string-op expression |

select-attribute select-member-op context |

select-attribute select-concept-op expression |

select-attribute select-numeric-op expression |

select-attribute select-range-op numeric-literal “:” numeric-literal |

function select-string-op expression |

function select-numeric-op expression |

function select-range-op numeric-literal “:” numeric-literal

select-attribute := CONCEPT |

CONCEPT_NAME |

CONCEPT_CODE |

CONCEPT_ID |

CONCEPT_STATUS |

TERM |

TERM_NAME |

TERM_CODE |

TERM_ID |

TERM_STATUS |

NAMESPACE |

NAME |

CODE |

ID |

STATUS |

PREFERRED_NAME |

RESOLVED_NAME |

QUALIFIED_NAME |

PRIMITIVE |

KIND |

SUBSET |

DEFINING_CONCEPT |

PARENT |

PARENT_PLUS |

ANCESTOR |

ANCESTOR_PLUS |

CHILD |

DESCENDANT |

DTSSynonymType [“ (SA)” ] |

DTSPropertyType [“ (CP)” ] [ . DTSPropertyQualifierType [“ (CPQ”) ] ] |

DTSPropertyType [ (“TP”) ] [ . DTSPropertyQualifierType [ (“TPQ”) ] ] |

[ DEF ] DTSRoleType [ (“R”) ] |

[ INV ] DTSRoleType [ (“R”) ] |

[ INV ] DTSConceptAssociationType [ (“CA”) ] |

[ . DTSAssociationQualifierType [ (“CAQ”) ] ]

[ INV ] DTSTermAssociationType [ (TA) ]

[ . DTSAssociationQualifierType [ (“TAQ”) ] ]

select-string-op := EQUALS |

NOT_EQUALS |

MATCHES |

NOT_MATCHES |

FOLLOWS |

PRECEDES

select-member-op := MEMBER_OF |

NOT_MEMBER_OF

select-concept-op := CHILD_OF |

NOT_CHILD_OF |

CHILD_OF_PLUS |

NOT_CHILD_OF_PLUS |

DESCENDANT_OF |

NOT_DESCENDANT_OF |

DESCENDANT_OF_PLUS |

NOT_DESCENDANT_OF_PLUS

select-numeric-op := “=” |

“<>” |

“>” |

“>=” |

“<” |

“<=”

select-range-op := IN_RANGE |

NOT_IN_RANGE

select-unop := EXISTS |

NOT_EXISTS

conditional-statement := IF predicates statement-block |

ELSE statement-block |

ELSEIF predicates statement-block

predicates := predicate |

predicates log-op predicates |

( predicates )

predicate := selector |

variable unop |

variable select-string-op expression |

variable select-numeric-op expression |

variable select-range-op numeric-literal “:” numeric-literal

create-context-statement := CREATE “<” authority “>” “;”

CREATE “[“ namespace “:” authority

[ “:” nstype [ “:” linked_namespace ] ] “]” “;” |

CREATE create-context FROM[/TERMS] collection “;” |

CREATE create-context FROM build-context log-op build-context “;”

nstype := THESAURUS |

ONTYLOG |

ONTYLOG_EXTENSION

create-context := “{“ subset “:” authority ”}” |

conset |

termset

build-context := “{“ subset”}” |

conset |

termset

delete-context-statement:= DELETE context “;”

edit-statement := CREATE_CONCEPTS create-concepts-list “;” |

CREATE_TERMS create-terms-list “;” |

DELETE_CONCEPTS [ delete-concepts-mods ] “;” |

DELETE_CONCEPTS [ delete-concepts-mods ] concept-list “;”|

DELETE_TREES [ delete-trees-mods ] “;” |

DELETE_TREES [ delete-trees-mods ] concept-list “;” |

DELETE_TERMS[/PERMANENT] “;” |

DELETE_TERMS[/PERMANENT] term-list “;” |

DELETE [delete-attr-mod ] delete-attr-list “;” |

SET set-attr-list “;” |

UPDATE update-attr-list “;”

create-concepts-list := concept [ “:” string-literal [ “:” integer ] ] [ “,” create-concepts-list ] |

concept [ “::” integer ] [ “,” create-objects-list ]

create-terms-list := term [ “:” string-literal [ “:” integer ] ] [ “,” create-terms-list ] |

term [ “::” integer ] [ “,” create-objects-list ]

concept-list := concept [ “,” concept-list ]

term-list := term [ “,” term-list ]

delete-concepts-mods := delete-concepts-mod [ delete-concepts-mods ]

delete-concepts-mod :=“/” PRUNE_TERMS [ “=” boolean-literal ] |

“/” PERMANENT

delete-tree-mods := delete-tree-mod [ delete-tree-mods ]

delete-tree-mod := “/” AXIS “=” string-literal |

“/” PRUNE_TERMS [ “=” boolean-literal ] |

“/” RETAIN_HEAD [ “=” boolean-literal ] |

“/” PERMANENT

delete-attrs-mod := “/” PRUNE_TERMS [ “=” boolean-literal ]

delete-attr-list := delete-attribute [ “=” expression [ “.” expression ] ] [ “,” delete-attr-list ]

delete-attribute : DTSPropertyType [ ”(CP)” ]

[ ”.” DTSPropertyQualifierType [ “(CPQ)” ] ] |

DTSPropertyType [ ”(TP)” ]

[ ”.” DTSPropertyQualifierType [ “(TPQ)” ] ] |

DTSSynonymType [ ”(SA)” ] |

DEFINING_CONCEPT |

DEF DTSRoleType [ ”(R)” ] |

[ INV ] DTSConceptAssociationType [ ”(CA)” ]

[ ”.” DTSAssociationQualifierType [ “(CAQ)” ] ] |

[ INV ] DTSTermAssociationType [ ”(TA)” ]

[ ”.” DTSAssociationQualifierType [ “(TAQ)” ] ]

set-attr-list := ( set-attr-arg | set-var-arg ) [ “,” set-attr-list ]

set-attr-arg := set-attribute ”=” expression [ “.” expression ]

set-attribute := CONCPT_NAME |

CONCEPT_STATUS |

TERM_NAME |

TERM_STATUS |

DTSPropertyType [ ”(CP)” ]

[ ”.” DTSPropertyQualifierType [ “(CPQ)” ] ] |

DTSPropertyType [ ”(TP)” ]

[ ”.” DTSPropertyQualifierType [ “(TPQ)” ] ] |

DTSSynonymType [ ”(SA)” ] |

DEFINING_CONCEPT |

DEF DTSRoleType [ ”(R)” ] |

[ INV ] DTSConceptAssociationType [ “(CA)” ]

[ ”.” DTSAssociationQualifierType [ “(CAQ)” ] ] |

[ INV ] DTSTermAssociationType [ ”(TA)” ]

[ ”.” DTSAssociationQualifierType [ “(TAQ)” ] ]

update-attr-list := set-attr-arg [ “,” update-attr-list ]

export-statement := EXPORT_CONCEPTS [ export-concepts-mods ] “;” |

EXPORT_CONCEPTS [ export-concepts-mods ] “;” |

EXPORT_SUBSET [ export-subset-mod ] “;” |

EXPORT_NAMESPACE [ export-namespace-mod ] “;” |

EXPORT [ export-mods ] export-list [ SORTED_BY sort-list ] “;”

export-concepts-mods := export-concepts-mod [ export-concepts-mods ]

export-concepts-mod := “/” EXPORTFILE “=” string-literal |

“/” SUBSET_VIEW [ “=” boolean-literal ] |

“/” TYPEDEFS [ “=” boolean-literal ]

export-subsets-mod := “/” EXPORTFILE “=”string-literal

export-namespace-mod := “/” EXPORTFILE “=”string-literal

export-mods := export-mod [ export-mods ]

export-mod := “/” APPEND [ “=” boolean-literal ] |

“/” DATE_FORMAT “=”string-literal |

“/” DELIMITER “=”string-literal |

“/” EXPORTFILE “=”string-literal |

“/” HEADER “=”boolean-literal |

“/” LIMIT “=” integer-literal |

“/” TIME_FORMAT “=”string-literal |

“/” UNIQUE [ “=” boolean-literal ]

for-statement:= for-attr statement-block

for-attr:= [INV] SYNONYM |

PROPERTY |

[INV] ASSOCIATION |

ROLE |

PARENT |

CHILD |

DESCENDANT |

DEFINING_CONCEPT |

DTSSynonymType [“(SA)”] |

DTSPropertyType [“(P)”] |

[ DEF ] DTSRoleType [“(R)”] |

[ INV ] DTSRoleType [“(R)“] |

[ INV ] DTSConceptAssociationType [“(CA)”] |

[ INV ] DTSTermAssociationType [“(TA)”]

set-statement := SET set-var-list “;”

set-var-list := set-var-arg [ ”,” set-var-list ]

set-var-arg := variable “=” expression

variable := APPEND |

AXIS |

DATE_FORMAT |

TIME_FORMAT |

DELIMITER |

EXPORTFILE |

HEADER |

LIMIT |

PRUNE_TERMS |

RETAIN_HEAD |

SIZE | //read-only, cannot be used in a set-statement

TYPEDEFS |

UNIQUE |

”%” name-string

output-statement := LOG output-list “;” |

PRINT output-list “;”

output-list := expression [ “,”expression ]

parameter-statement := PARAMETER parameter-list “;”

parameter-list := parameter-arg [ “,” parameter-list ]

parameter-arg := parameter [”:”[ parameter-type ] [ ”:” help-string ] ]

parameter := ”@” string ”@”

parameter-type := CONCEPT |

TERM |

INTEGER |

NUMBER |

BOOLEAN |

FILE |

STRING

help-string : = string-literal

constrain-statement := CONSTRAIN parameter TO constrain-list “;”

constrain-list := constrain-arg [ ”,” constrain-list ]

constrain-arg := select-string-op expression |

select-member-op context |

select-concept-op expression |

select-numeric-op expression |

select-range-op numeric-literal “:” numeric-literal

expression := expr-element [ expr-op expression ]

expr-element:= parameter |

function |

select-attribute |

variable |

string-literal

expr-op := “+” | “-“ | “&”

function := COUNT ”(” function-arg ”)” |

LENGTH ”(” function-arg ”)” |

”%” name-string ”(” function-arg ”)”

function-arg := select-attribute |

SYNONYM |

PROPERTY |

ASSOCIATION |

ROLE

export-list := export-arg [ , export-list ]

export-arg := ”(” export-expr ”)” |

export-expr

export-expr:= export-expr-element [ expr-op export-expr ]

export-expr-element := expr-element |

CONCEPT “->” concept-disp-attr |

TERM “->” term-disp-attr |

SYNONYM [“.” TYPE ] |

SYNONYM[“.” VALUE |

SYNONYM “->” term-disp-attr | INV SYNONYM “->” concept-disp-attr |

PROPERTY [“.” TYPE ] |

PROPERTY “.” VALUE |

ASSOCIATION [“.” TYPE ] |

ASSOCIATION “.” VALUE |

ROLE [“.” TYPE ] |

ROLE “.” VALUE |

PARENT “->” concept-disp-attr ] |

CHILD “->” concept-disp-attr |

DESCENDANT “->” concept-disp-attr |

DEFINING_CONCEPT “->” concept-disp-attr |

DTSSynonymType [“(SA)”] “->” term-disp-attr |

DTSPropertyType [“(P)”] “|” encode-attr [ ->” concept-disp-attr ] |

DTSPropertyType [“(P)”] “|”DTSPropertyType [“(P)”] [ ->” concept-disp-attr ] |

[ DEF ] DTSRoleType [“(R)”] [.GROUP ] |

[ INV ] DTSRoleType [“(R)“] [.GROUP ] |

[ DEF ] DTSRoleType [“(R)”] “->” concept-disp-attr |

[ INV ] DTSRoleType [“(R)”] “->” concept-disp-attr |

[ INV ] DTSConceptAssociationType [“(CA)”] “->” concept-disp-attr |

[ INV ] DTSTermAssociationType [“(TA)”] “->” term-disp-attr

encode-attr := CONCEPT_NAME [ “[“ namespace “]” ] |

CONCEPT_CODE [ “[“ namespace “]” ] |

CONCEPT_ID [ “[“ namespace “]” ]

concept-disp-attr := CONCEPT_NAME |

CONCEPT_CODE |

CONCEPT_ID |

CONCEPT_STATUS |

NAMESPACE |

NAME |

CODE |

ID |

STATUS |

PRIMITIVE |

KIND |

PREFERRED_NAME |

QUALIFIED_NAME |

RESOLVED_NAME |

DTSPropertyType [“(CP)”]

term-disp-attr := TERM_NAME |

TERM _CODE |

TERM _ID |

TERM_STATUS |

NAME |

CODE |

ID |

STATUS |

DTSPropertyType [“(TP)”]

sort-list := sort-attribute [, sort-list ]

sort-attribute := concept-string | sort-attribute must exist in export-list

SYNONYM |

PROPERTY |

ASSOCIATION |

ROLE |

PARENT |

CHILD |

DESCENDANT |

DTSSynonymType [“(SA)”] |

DTSPropertyType [“(CP)”] |

DTSPropertyType [ (TP)”] |

DTSRoleType [“(R)”] |

DTSConceptAssociationType [“(CA ”] |

DTSConceptAssociationType [“(TA)”]

string-literal := “ string “ |

‘ string ‘

numeric-literal := parameter |

integer [ ”.” [integer] ] |

” integer [ ”.” [integer] ] ” |

’ integer [ ”.” [integer] ] ’

integer-literal := parameter |

integer |

” integer ” |

’ integer ’

boolean-literal := parameter |

”TRUE” |

’TRUE’ |

”FALSE ” |

’FALSE’

namespace := name-string | “^” string “^”

linked_namespace := name-string | “^” string “^”

subset := name-string | “^” string “^”

conset := name-string | “^” string “^”

termset := name-string | “^” string “^”

concept := name-string | “^” string “^” | string-literal

term := name-string | “^” string “^” | string-literal

name-string := name-char [ name-string ]

name-char := alpha-char | digit-char | “_”

integer := digit-char [ integer ]

comment := -- comment text to end of line |

/* comment text */

Appendix B - Regular Expression Primer

Regular Expressions are a technique to match and/or manipulate string values. Using a Regular Expression (or ‘RegEx’), it is possible to search for attributes whose value matches a pattern, validate that an input value matches a given pattern, or even edit a value based on a pattern. TQL supports the first use-case through its MATCHES operator. The Import Wizard Module supports the second and third use-cases via its Parameter Filter functions.

RegExes are very powerful and potentially confusing. At one level, a RegEx pattern is simply a text string, but this string can incorporate a number of special formats that enable quite sophisticated matching. To test for a valid email address, for example, you could use the RegEx pattern:

[A-Z0-9._%+-]+@[A-Z0-9.-]+\.[A-Z]{2,4}

The objective of this Primer is to describe the basic elements of RegExes and show how they can be used for simple pattern matching in TQL. By the end of the Primer, you should be able to explain the RegEx above! For a comprehensive discussion of regular expressions, see the regular expression tutorial at http://www.regular-expressions.info/.

Follow along with the examples below by opening the TQL RegEx Helper dialog (shown below). This dialog lets you test RegEx expressions and review the RegEx Reference document.

Matching Literals

In the simplest RegEx patterns, the characters stand for themselves. So to see if a value equals “abc” in TQL, use the following (since the RegEx is itself a string, it must be surrounded in quotes):

value MATCHES “abc”

As will be discussed below, certain characters have special meanings and cannot be used literally in a RegEx. The special characters are the backslash ‘\’, the caret ‘^’, the dollar sign ‘$’, the period or dot ‘.’, the vertical bar or pipe symbol ‘|’, the question mark ‘?’, the asterisk or star ‘*’, the plus sign ‘+’, the opening parenthesis’(‘, the closing parenthesis ‘)’, the opening square bracket ‘[‘, and the opening curly brace ‘{‘. To match these characters literally in a RegEx, they must be preceded (“escaped”) with a backslash. To match the string “$15.50”, for example, use:

value MATCHES “\$15\.50”

Character Classes

Character classes are a way to denote that one of a number of characters is permissible for a match. In a RegEx, you describe a character class by surrounding the class “definition” with square brackets. To match an ‘a’ or an ‘e’, use ‘[ae]’. The RegEx ‘gr[ae]y’ would match either ‘gray’ or ‘grey’. Note that a character class matches only a single character; ‘gr[ae]y’ does not match ‘graay’ or ‘greay’ or any other string. The order of the characters inside a character class does not matter.

You can use a hyphen inside a character class to specify a range of characters: ‘[0-9]’ matches a single digit between 0 and 9. You can include more than one range in a class: ‘[0-9a-fA-F]’ matches a single hexadecimal digit, case insensitively. And you can combine ranges and single characters: ‘[0-9a-fXA-F]’ matches a hexadecimal digit or the letter X.

A caret after the opening square bracket negates the character class. The result is that the character class matches any character that is not in the character class. So the RegEx ‘q[^x]’ matches the ‘qu’ in ‘question’, but does not match the ‘q’ in ‘qxyz’ or ‘Iraq’ (since there is no character after the q for the negated character class to match).

Predefined Character Classes

RegExes support a number of predefined character classes to simplify writing of patterns. The most common are:

. matches any character

\d matches a digit: [0-9]

\D matches a non-digit: [^0-9]

\s matches a whitespace character: [\t\n\x0B\f\r]

\S matches a non-whitespace character: [^\s]

\w matches a word-character: [a-zA-Z_0-9]

\W matches a non-word character: [^\w]

Use ‘abc\d’ to match ‘abc1’, ‘abc2’, etc., and ‘\w=3’ to match ‘a=3’, B=3’, and ‘6=3’.

Character Repetition

RegExes contain elements called “quantifiers” to signify that that a character (or character class) can occur multiple times. If ‘X’ is a character or character class, the quantifiers are:

X? X, once or not at all

X* X, zero or more times

X+ X, one or more times

X{n} X, exactly n times

X{n,} X, at least n times

X{n,m} X at least n but not more than m times

Note the difference between square and curly brackets. Square brackets denote a character class, while curly brackets (braces) are for repetition.

Some examples:

‘\w+=\d+’ matches ‘var=34’ or any similar string.

‘abc.*’ is the same as starts with ‘abc’, while:

‘.*abc’ is ends with ‘abc’, and

‘.*abc.*’ is contains ‘abc’

‘[1-9][0-9]{3}’ matches a number between 1000 and 9999 and

‘[1-9][0-9]{2,4}’ matches a number between 100 and 99999.

Alternation and Grouping

Whole RegEx patterns can be alternated and grouped. To specify alternate RexEx patterns, use the pipe character. The RegEx ‘cat|dog|fish’ matches “cat” or “dog” or “fish”. Alternation has the lowest precedence of all RegEx operators so use parenthesis for grouping:

‘cat|dog food’ matches “cat” or “dog food”, but

‘(cat|dog) food’ matches “cat food” and “dog food”

Warning

Finally, be careful about the use of the backslash. Remember that backslashes in literals need to be escaped. The RegEx Helper takes care of this automatically, so the examples in this Primer can be entered as shown, but when writing TQL queries, always double backslashes. To use the last example in the Matching Literals section, use:

value MATCHES “\\$15\\.50”

and to test that a value that contains a backslash, the following is required:

value MATCHES “.*\\\\.*”

Appendix C - Date Format String

Date and time formats are specified by date and time pattern strings from the Java SimpleDateFormat class. The discussion below provides a simplified description of the format string. Within date and time pattern strings, unquoted letters from `'A'` to `'Z'` and from `'a'` to `'z'` are interpreted as pattern letters representing the components of a date or time string. Text can be quoted using single quotes (`'`) to avoid interpretation. `"''"` represents a single quote. All other characters are not interpreted; they're simply copied into the output string during formatting or matched against the input string during parsing.

The following pattern letters are defined (all other characters from `'A'` to `'Z'` and from `'a'` to `'z'` are reserved):

Letter | Date or Time Component | Presentation | Examples
`G` | Era designator | Text | `AD`
`y` | Year | Year | `1996`; `96`
`M` | Month in year | Month | `July`; `Jul`; `07`
`w` | Week in year | Number | `27`
`W` | Week in month | Number | `2`
`D` | Day in year | Number | `189`
`d` | Day in month | Number | `10`
`F` | Day of week in month | Number | `2`
`E` | Day in week | Text | `Tuesday`; `Tue`
`a` | Am/pm marker | Text | `PM`
`H` | Hour in day (0-23) | Number | `0`
`k` | Hour in day (1-24) | Number | `24`
`K` | Hour in am/pm (0-11) | Number | `0`
`h` | Hour in am/pm (1-12) | Number | `12`
`m` | Minute in hour | Number | `30`
`s` | Second in minute | Number | `55`
`S` | Millisecond | Number | `978`
`z` | Time zone | General time zone | `Pacific Standard Time`; `PST`; `GMT-08:00`
`Z` | Time zone | RFC 822 time zone | `-0800`

Pattern letters are usually repeated, as their number determines the exact presentation:

· Text: For formatting, if the number of pattern letters is 4 or more, the full form is used; otherwise a short or abbreviated form is used if available. For parsing, both forms are accepted, independent of the number of pattern letters.

· Number: For formatting, the number of pattern letters is the minimum number of digits, and shorter numbers are zero-padded to this amount. For parsing, the number of pattern letters is ignored unless it's needed to separate two adjacent fields.

· Year: The following rules are applied for year:

o For formatting, if the number of pattern letters is 2, the year is truncated to 2 digits; otherwise it is interpreted as a number.

o For parsing, if the number of pattern letters is more than 2, the year is interpreted literally, regardless of the number of digits. So using the pattern "MM/dd/yyyy", "01/11/12" parses to Jan 11, 12 A.D.

o For parsing with the abbreviated year pattern ("y" or "yy"), `the format string` must interpret the abbreviated year relative to some century. It does this by adjusting dates to be within 80 years before and 20 years after the current time. For example, using a pattern of "MM/dd/yy", the string "01/11/12" would be interpreted as Jan 11, 2012 while the string "05/04/64" would be interpreted as May 4, 1964. During parsing, only strings consisting of exactly two digits, will be parsed into the default century. Any other numeric string, such as a one digit string, a three or more digit string, or a two digit string that isn't all digits (for example, "-1"), is interpreted literally. So "01/02/3" or "01/02/003" are parsed, using the same pattern, as Jan 2, 3 AD. Likewise, "01/02/-3" is parsed as Jan 2, 4 BC.

Otherwise, specific forms are applied. For both formatting and parsing, if the number of pattern letters is 4 or more, a long form is used. Otherwise, short or abbreviated form is used.

· Month: If the number of pattern letters is 3 or more, the month is interpreted as text; otherwise, it is interpreted as a number.

· General time zone: Time zones are interpreted as text if they have names. For time zones representing a GMT offset value, a number is used.

· RFC 822 time zone: For formatting, the RFC 822 4-digit time zone format is used.

#### Examples

The following examples show how date and time patterns are interpreted in the U.S. locale. The given date and time are 2001-07-04 12:08:56 local time in the U.S. Pacific Time time zone.

Date and Time Pattern | Result
`"yyyy.MM.dd G 'at' HH:mm:ss z"` | `2001.07.04 AD at 12:08:56 PDT`
`"EEE, MMM d, ''yy"` | `Wed, Jul 4, '01`
`"h:mm a"` | `12:08 PM`
`"hh 'o''clock' a, zzzz"` | `12 o'clock PM, Pacific Daylight Time`
`"K:mm a, z"` | `0:08 PM, PDT`
`"yyyyy.MMMMM.dd GGG hh:mm aaa"` | `02001.July.04 AD 12:08 PM`
`"EEE, d MMM yyyy HH:mm:ss Z"` | `Wed, 4 Jul 2001 12:08:56 -0700`
`"yyMMddHHmmssZ"` | `010704120856-0700`
`"yyyy-MM-dd'T'HH:mm:ss.SSSZ"` | `2001-07-04T12:08:56.235-0700`

Appendix D – Writing a User Function

This Appendix describes how to write a TQL User Function. A User Function, identified in a TQL query by a name which begins with a percent sign (“%”), is a user-developed extension to TQL. A User Function is created by writing a Java class that implements the TQLFunction interface class. This class, packaged in a jar file and placed in the classpath, e.g., lib\modules, is recognized by TQL on start-up and can subsequently be used in expressions in the same way as a TQL Function.

The TQLFunction class defines the following required methods:

String getName()

Returns the base name of this user function (without the initial "%").

boolean isAggregator()

Returns whether the function returns one value for each extractValues argument object or one value for all the arguments (an aggregator). The value of this method is typically false.

Some functions, such as COUNT, are aggregators and must be handled as 'independent' export attributes. In this case, they must return true to isAggregator() and the length of the returned array will be one, not the size of the argument array.

boolean forceFullSearch(String op, String value)

Returns whether this function as used in a selector with the operator op and argument value should search all objects in the TQL context. This is typically false and search optimizers/accelerators can be used. The COUNT function, on the other hand, must search all concepts when a value of zero is acceptable: COUNT(MyProp) < 2. In this case, forceFullSearch must return true to inhibit optimization. Returning true generally has negative performance implications.

String validateArgument(TQLField field)

Returns the empty string if the specified function argument is valid, otherwise returns an error message. Called during query parse. TQLField is an object that encapsulates all TQL Attribute forms: TQL Variables, User Variables, and Attribute references.

String[] extractValues(Object[] objs, TQLField field)

Returns the result(s) of the function as applied to the argument objects. The field argument can be used to determine the type of object used in the invocation if multiple types are permitted, e.g. an inverse association vs. a regular association. objs is the array of objects resulting from evaluating the function’s argument, and field is the object that defines the argument type. Returns a String array of function values, this array can be of different size than objs.length.

To simplify coding of User Functions, TQL includes the TQLFunctionAdapter class that provides default implementations of the TQLFunction methods. User Function classes can extend this class to get default behaviors. At a minimum, the getName and extractValues methods must be overridden. A helper method is included for extracting the default string value of an attribute.

public String getName()

Returns the empty string. Must be overridden.

public boolean isAggregator()

Returns false.

public boolean forceFullSearch(String op, String value)

Returns false.

public String validateArgument(TQLField field) {

Returns success: the empty string.

public String[] extractValues(Object[] objs, TQLField field)

Returns an array containing the result of extractValue for each of the arguments. The field argument is not used. Must be overridden.

protected String extractValue(Object obj, TQLField field) {

Returns the default string value of a DTS Attribute, e.g. name of a Concept, the name of the target Concept for a ConceptAssociation.

For additional information on the TQLFunction, TQLFunctionAdapter, TQLField and utility QualifiedObject classes, see the TQL Javadoc file in the DTSInstall\bin\tqleditor folder.

The listing below shows the code for the TQL User Function %REVERSE(arg). This function accepts a DTSPropertyType as an argument and returns, via the extractValues method, the Property values with their characters reversed.

import com.apelon.dts.client.attribute.DTSProperty;

import com.apelon.dts.client.attribute.DTSPropertyType;

import com.apelon.modules.dts.editor.tql.beans.TQLField;

/**

* Sample TQL User Function that reverses the value of a Property

* <p>

* Copyright (c) 2013 Apelon, Inc. All rights reserved.

* @since 4.0

*/

public class ReverseFunction extends TQLFunctionAdapter {

public String getName() {

return "Reverse";

}

public String validateArgument(TQLField field) {

if (field!=null && field.getAttribute()!=null && (field.getAttribute().getObject() instanceof DTSPropertyType))

return "";

return "Argument of REVERSE function must be a Property Type.";

}

public String[] extractValues(Object[] objs, TQLField field) {

String[] results = new String[objs.length];

for (int i=0; i<objs.length; i++) {

results[i] = (objs[i] instanceof DTSProperty)?reverse(((DTSProperty)objs[i]).getValue()):"";

}

return results;

}

//reverse the characters in a string

private String reverse(String s) {

StringBuffer sb = new StringBuffer();

for (int i=s.length()-1; i>=0; i--)

sb.append(s.charAt(i));

return sb.toString();

}

}